DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.693e-28 Identity = 80/228 (35.09%), Postives = 131/228 (57.46%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHPYHHL 737 M RGKI IKRIEN T RQVT+SKRR GL KK +EL+VLCDA++ +I+ SSTGKL ++ + +Q+ + K G + + E++ +L L++ R L+ +R+ GE L + Y+ L++L +++S+ +R+RK +++ Q++ ++K R +EE + N+ + E A E +E E ++ VL FP G + +L L HQ + +HHL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDL-WNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNL---LLEFDARQEDPYGLVE---QEGDYNSVLG-FPNGGHR----ILALRLQPNHHQPNHHHHL 216
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.211e-28 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELA------VLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKP---AEEHHHQVLDH 647 MGRGK+ +KRIEN +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ G+L ++ T + + R + + ++ + EL+ L+ LQ + R GEDL + +L+QLE+++E S+ +R KN+ L Q+ L+RKE+ L++ N ++ R IQE + + P A E + + L H Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTL--ERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGENMLHISCQDVGPSGHASEANQEFLHH 205
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.211e-28 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELA------VLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKP---AEEHHHQVLDH 647 MGRGK+ +KRIEN +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ G+L ++ T + + R + + ++ + EL+ L+ LQ + R GEDL + +L+QLE+++E S+ +R KN+ L Q+ L+RKE+ L++ N ++ R IQE + + P A E + + L H Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTL--ERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGENMLHISCQDVGPSGHASEANQEFLHH 205
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.211e-28 Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT-GTRIPEHDSREQI----FNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE 566 MGRG++ +KRIE RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ GKL ++C+ M + +ER K G P +RE + E L+ LQ S R GEDLG + +L+ LE +L+ S+ ++R + +L+ QL + +RKE L E N + + + E Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLME 175
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.771e-28 Identity = 82/231 (35.50%), Postives = 126/231 (54.55%), Query Frame = 3 Query: 48 RIMGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLK----VTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHPY 728 +I RGKI IKRIEN T RQVTF KRR+GLLKK +ELSVLCDA++ L++FSS G+L +Y +++ IER K + + + E A L+++ LQ S R G+++ ++ + +L QLE L+ + K+R RKNELL +++ ++R+E L+ +N + + E L Q M + + Q + H+ P + LQ +I HQ Y Sbjct: 41 KIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN--SVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGL--QTVNMMGSASTSEYVQNMIHY------DPRNFLQF---NIMHQPQYY 258
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 3.771e-28 Identity = 70/168 (41.67%), Postives = 106/168 (63.10%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPE---HDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M RG+ +KRIENPT+RQVTFSKRR GLLKK ELSVLCDA++ LI+FS G+L ++ + P +++ I+R T + +Q+ ++ L K+ L S R+ GE+L ++L LE +LE S++ +R +K ELL++Q+ L+ KER L ++N N+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAP-SLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENL 167
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.771e-28 Identity = 70/207 (33.82%), Postives = 124/207 (59.90%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQP 674 MGRGKI IKRIEN + RQVT+SKRR G+LKK E+SVLCDA++ +IIF+S+GK+ ++ + + I+++ K+TG R+ + E + NE+ ++K+ +Q+ +R GED+ S+ + +L LE L++ + +R+++N+LL+ +R+K + +EEE + +++ A + + + ++ PF QP Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST--SLVDILDQYHKLTGRRLWD-AKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRM----MRKKTQSMEEEQDQLNWQLRQLEIASMNRNMGEIGEVFHQRENEYQTQMPFAFRVQP 200
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.771e-28 Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTG--TRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAAL 581 MGRGKI IKRIEN +RQVTFSKRRAGLLKK HELSVLCDA++ +I+FS +GKL ++ + + + +++ I ++ E+ +L+ E LQ G+ L + +L LE +L S+ VR+RK LL +QL+ R KE+ E EN + R +QE R+ L Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQVQELRSFL 178
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.402e-28 Identity = 85/238 (35.71%), Postives = 130/238 (54.62%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFR--MEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQ-LSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMY---RWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHPYHHLQLAQ 749 MGRGKI IKRIEN T RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS G+L +Y + +E+ + + + + + E + LR++ LQ + R G+ + ++ DL Q+E+ LE + K+R RKNELL +++ ++++E +E +N NMY + ++ R + M A E+ H V + + Q + + Q HQ+ P LQL Q Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKRE--VELQNDNMYLRSKVVENERG--QQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQ--PQHYAHQLQP-TTLQLGQ 231
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.402e-28 Identity = 72/172 (41.86%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 48 RIMGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKV----TGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMY 551 R +GRGKI IKRIEN T RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS G+L +Y ++ IER K + T + + E + LR + LQ R + GE L ++ DL LE ++E ++K+R +KNELL +++ ++++E ++ N+N Y Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKRE--IDLHNNNQY 182 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |