DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 7.113e-27 Identity = 69/157 (43.95%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER--RLKVTGTRIPEHDSREQIF-NELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRK 515 MGRGKI IKRI+N T+RQVTFSKRR+GL KK ELS+LCDA++GL++FSST +L + + M+ IIER K + S +++ E A LR++ LQ R+ G+ L + +DL LE +LE S+ +R RK+ ++ Q+ L RK Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS--SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.213e-26 Identity = 77/196 (39.29%), Postives = 117/196 (59.69%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT----GTRIPEHDSREQI-------FNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE-HRAALEYQQAAME 605 M RGKI +KRIENP RQVTF KRR GLLKK ELSVLCDA+IG++IFS GKL + T+ ME +I++ +K T G+ ++EQ+ +E+ VL++E LQ + G G++ ++L LE LE ++++R K +++ Q++ +LR KE +L+ N + I+E + + L+ A ME Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKG-TMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIEENNNSILDANFAVME 195
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.069e-26 Identity = 74/175 (42.29%), Postives = 104/175 (59.43%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERR-LKVTGTRIPEHDSREQIFNE---LAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE 566 M R KI IK+I+N T RQVTFSKRR GL KK ELSVLCDA + LIIFSSTGKL Y + M+QI+ERR L + S E E + L KE +R+ GE+L + ++L QLE LE+ +++V +RK + + ++++ L++K L EEN + + + E Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS--SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVME 173
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 3.530e-26 Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 3 Query: 60 RGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNE----LAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHR 572 R +IAI+RI+N RQVTFSKRR GL KK ELS+LCDA++GL++FS+TGKL Q+ + MEQII+R + T S+ + E A L++E L +R+ GE+L + + L +LE LES + V K++ + ++D L RK L EEN + +Q R Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST--SMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSR 194
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 3.530e-26 Identity = 72/202 (35.64%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER--RLKVTGTRIPEHDSREQIF-NELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE-HRAALE-YQQAAMEAKPAEEHHHQVLD 644 MGRGKI I++I++ T+RQVTFSKRR GL+KK EL++LCDA++ LIIFS+T KL + + ++ IER K+ + S + + E LR+E LQ + R+ TG +L + +L +E +LE S+ +R ++ ++L ++ L RK ++ EN + R +Q H+ +E Y++A + HH+++D Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS--SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVELYKKAYGTSNTNGLGHHELVD 200
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 4.610e-26 Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER----RLKVTGTRIPEH--DSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLE 530 MGRGK+ ++RIEN +RQVTFSKRR GLLKK HE++VLCD + I+FS+ G L Y + ME+I+E+ L G + E + + + LR L+ S R G++L S+ D+ QLE+++++S+N +R RK +LL ++ L +K LE Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.136e-24 Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPE-HDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGS-IPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALE 584 M RGK+ ++RIENP RQVTF KRRAGLLKK ELS+LC+A IG+IIFS+ GKL T ME++IER +G + D R E VL++E LQ +R G + ++L+ LE LE + +R K +++ Q++ L+ KE ML+ N + I E ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTG-TMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLID 178
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.136e-24 Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPE-HDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGS-IPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALE 584 M RGK+ ++RIENP RQVTF KRRAGLLKK ELS+LC+A IG+IIFS+ GKL T ME++IER +G + D R E VL++E LQ +R G + ++L+ LE LE + +R K +++ Q++ L+ KE ML+ N + I E ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTG-TMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLID 178
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.530e-24 Identity = 66/169 (39.05%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER-RLKVTGTRIPEHDSREQIF---NELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M R KI I++I+N T RQVTFSKRR GL KK ELSVLCDA + LIIFSSTGKL ++C+ M++++ER L+ + S E ++ A + KE +R+ GE+L + ++L QLE LE+ + +V + K++ + ++ L++K L +EN + Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS--SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRL 167
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.530e-24 Identity = 77/221 (34.84%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER----RLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNS 704 M R + IKRIE+ RQVTFSKRR GL KK ELSVLCDA + LI+FSSTGKL + + M +II++ + P D + ++ A L ++ L +R+ GE+L + D+L QLE LE+ +++V K++ +Q+ L+RK L EEN ++ + + PAE+ QV+D F+ + Q S + A +S Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS--SMNEIIDKYNTHSNNLGKAEQPSLDLNLE-HSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEEN-------------MQLRNQVSQISPAEK---QVVDTENFVTEGQSSESVMTALHS 202 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |