DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.304e-24 Identity = 72/201 (35.82%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQ-EHRAALEYQQAAMEAKPAEEHHHQVLDHFP 653 MGR K+ IKRIEN ++RQVTFSKRR GL++K +LSVLCDA + L++ S++GKL + + + +I++R K + D + + N L+L + G ++ ++ D L QLE LE++++ R +K EL+ + ++NL+ KE+ML+EEN + ++ H E A ME PA Q+ D+ P Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGD-NLVKILDRYGKQHADDLKALDHQSKALN----YGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAE---AEMEMSPA----GQISDNLP 189
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.256e-23 Identity = 68/216 (31.48%), Postives = 115/216 (53.24%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQ---------------EHRAALEYQ---QAAMEAKPAEEHHHQVLDH 647 M RGKI IKRIEN T RQVT+SKRR GL KK HEL+VLCDA++ +I+FSS+ KL +Y + ++I++ ++ + E++ L + R L+ +++ GE L + +L +LE E+E++ VR+RK + L Q++ ++K + ++ N+ ++ ++ + L YQ A + + HHH +H Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDV-WATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLVDNGGDYDSVLGYQIEGSRAYALRFHQNHHHYYPNH 215
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 5.275e-22 Identity = 57/167 (34.13%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRI--PEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 MGRGK+ I++IEN T RQVTFSKRR G++KK EL+VLCDA++ L++ SST KL Y + ++++ + K+ G + + + ++ ++ L RR + R G DL + +L L+ E+E ++ ++R++K ++ Q R+K + LEE ++++ Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRR---EISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDL 164
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 6.448e-20 Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQI---------------------------FNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M R + I+RIE+ RQVTFSKRR GL KK EL+VLCDA + L++FSSTGKL Q+ + M +II+ + + + D + I ++ + L ++ L +R+ GE+L + ++L Q+E LE+ + +V K++ Q++ L+RK L EEN + Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASS--NMNEIID-KYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRL 189
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 6.448e-20 Identity = 61/165 (36.97%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 MGR K+ IKRIEN ++RQVTFSKRR GL++K +LS+LC++ I +++ S +GKL + + M +II+R + D E+ N L + KE + S + D S+ D L LE +LE++++ R RK EL+ ++ +L++ E +L EEN + Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGD-NMSKIIDRYEIHHADELEALDLAEKTRNYLPL--KELLEIVQSKLEESNVDNASV--DTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTL 160
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.100e-19 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPF-RMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEE 536 MGRG+ IKRIENPT RQ TF KRR GL KK EL+VLCDA + L++FS++GKL + + + + +ER T T++ D R++ EL + L+ +R T +D L+ LEH LE+++ KVR K+ + ++ L+ R +EE Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKV-WADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEE 161
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.624e-13 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETR 353 MGR KI I RI + RQVTF+KR+ GL+KK +ELSVLCD +I LIIF+ST KL QY + M++++ LK T P H+SR A+ +KE + Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVL---LKYTEYNEP-HESRTNSDIVEALNKKENK 94
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSR 308 MGR KI I RI + RQVTF+KR+ GL+KK +ELSVLCD +I LIIF+ST KL QY + M++++ LK T P H+SR Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVL---LKYTEYNEP-HESR 79
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSR 308 MGR KI I RI + RQVTF+KR+ GL+KK +ELSVLCD +I LIIF+ST KL QY + M++++ LK T P H+SR Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVL---LKYTEYNEP-HESR 79
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MEF2C_HUMAN (Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSR 308 MGR KI I RI + RQVTF+KR+ GL+KK +ELSVLCD +I LIIF+ST KL QY + M++++ LK T P H+SR Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVL---LKYTEYNEP-HESR 79 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |