DC900357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29 Identity = 58/133 (43.61%), Postives = 89/133 (66.92%), Query Frame = 3 Query: 93 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 P+V DNG+GM+KAG AG P+ ++P+I+GR + G + VGD+AQ R L + YP+E G++++W+DME +W H + L++ P + PVL+TE LNP ANR+++T++ FE PA Y++IQAV Sbjct: 7 PVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFISYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAV 138
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT_CALFI (Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 3 Query: 309 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 WDDMEKIWHHTFYNELRVAPEE PVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAV Sbjct: 1 WDDMEKIWHHTFYNELRVAPEELPVLLTEAPLNPKANREKMTQIMFETFNMPAMYVAIQAV 61
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTT2_HUMAN (Actin-related protein T2 OS=Homo sapiens GN=ACTRT2 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 84 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 D ++ DNG+G KAG +G+ PR + SIVG + QK +VG+EA K+ L L P E G+++ WDD+E++W H F EL V P + P+L TE LNP+ NREKM ++MFE F PA Y++ QAV Sbjct: 8 DSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAV 143
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.015e-27 Identity = 57/134 (42.54%), Postives = 89/134 (66.42%), Query Frame = 3 Query: 93 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 P+V DNG+GM+KAG AG P+ V+P+I+GR + HT +++ VGD+AQ +R L++ YP+E G++S+W DME +W H + L + + PVL+TE LNP A+R+ ++++ FE PA Y++ QAV Sbjct: 7 PVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTAD----SRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAV 136
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP3_SCHPO (Actin-related protein 3 OS=Schizosaccharomyces pombe GN=act2 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 93 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------MGQK--------------DAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 P++ DNGTG K G+AG+DAP VFP+++ R G G M K D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE PLNP NRE +IMFE+FN +Y+A+QAV Sbjct: 7 PIIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV 162
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27 Identity = 58/147 (39.46%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 69 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK------DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 M + +V DNGTG K G+AG++ P + P+ + G QK D ++GDEA + + P++HG + NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFN P +Y+A+QAV Sbjct: 1 MNPASGLPAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSKGKQTAASQKKGVEDLDFFIGDEAIANSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENREFTAEIMFETFNVPGLYIAVQAV 147
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.591e-27 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 84 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 D+ ++ DNG+G+ KAG +G+ PR V S++G + + Q +VG EA K L L YPI+ G+V+ WDDMEK+W H F EL V P + PVL+TE LNP+ REK+ ++MFE F+ P Y++ AV Sbjct: 8 DVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQY--FVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAV 141
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 62/144 (43.06%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 99 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG------------VMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 V DNGTG K G+AG+ P+ + PS + V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAV Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAV 153
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 81 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQA 488 E + +V D GTG K GFAG P ++VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FE FN PAM++A Q+ Sbjct: 67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTMVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQS 202
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ACT_CRAVI (Actin (Fragment) OS=Crassostrea virginica PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3 Query: 324 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAV Sbjct: 1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 56 The following BLAST results are available for this feature:
BLAST of DC900357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 444
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900357 ID=DC900357; Name=DC900357; organism=Citrus sinensis; type=EST; length=547bpback to top |