DC900357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP5_DICDI (Actin-related protein 5 OS=Dictyostelium discoideum GN=arpE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.807e-12 Identity = 42/135 (31.11%), Postives = 76/135 (56.30%), Query Frame = 3 Query: 93 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVF 494 P++ DNG+ +AGFA D +P+ +F S+VG+ + T +VG K+ GD ++ LT+K P + ++ + E I+ + F+ E+PVL+TE NP R+ M++++FE +N ++ I ++F Sbjct: 32 PIIIDNGSYQCRAGFANDISPKLIFRSLVGKVKSTSSPIVGNSLKE---GDISR-----LTIKSPFDSNLLVHPPSQESIFDYIFHKFGIENEIENPVLITEPTSNPTFCRKYMSELLFECYNIKSVVYGIDSLF 158
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.739e-11 Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 96 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVA 479 +V DNG G++KAG G+ P V P+ + +P + + + DE ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F ++Y+A Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIA 129
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.060e-11 Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 3 Query: 96 LVCDNGTGMVKAGFAGDDA----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNE---LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVFPCMR 506 LV DNG +KAGF DD PR + P+ + R RH + YVG E + + L + P+E G + NW+ ++IW F+++ + P + ++LTE P + + + QI+FE + + Y + VF R Sbjct: 22 LVLDNGADTIKAGFVSDDKSDGKPR-IIPNCLARDRHRKI---------YVGSELEKCKDFSELAFRRPVEKGFIVNWEAQKEIWDREFFDDKAAQKCDPSDTRLILTEQPNSLPSLQTHCDQIVFEEYGFASYYRGLGPVFNAYR 157
BLAST of DC900357 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.631e-11 Identity = 27/71 (38.03%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 279 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 491 +PI+HG+V +WD +E +W L+V PE+ PVL++++P P REK+ +++FE PA ++A A+ Sbjct: 37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTAL 107 The following BLAST results are available for this feature:
BLAST of DC900357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 444
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900357 ID=DC900357; Name=DC900357; organism=Citrus sinensis; type=EST; length=547bpback to top |