DC900348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22 Identity = 52/144 (36.11%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECY--DMELYDWKKVDINDEAQKERVSQMIEDHEPFEGE 665 S ++DE+KR YSN T VA+ FWD +D EG+S+W+ +Y++ +E T++F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + F + + + D E Y W+K+D++ E K M++++ +EGE Sbjct: 291 SSFVMDEFKRKYSNEDT--MTVALPYFWDHFDREGFSIWYAEYRFPEELTMAFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDL-AFPLSDDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.431e-21 Identity = 66/234 (28.21%), Postives = 108/234 (46.15%), Query Frame = 3 Query: 6 VNIPNFRKILGEIKQ------------AESVPPVQSAKKPTQSXXXXXXXXXXXXXXXXXXXXXXXXXXDAGXXXXXXXXXXXXXXXXXXSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECY--DMELYDWKKVDINDEAQKERVSQMIEDHEPFEGE 665 VN P FR +LGE+K AE P ++ KK + ++ S I+DE+KR YSN T VA+ FW+ +D EG+S+W+ +YK+ +E T +F++ N + G QR+D RK F +++ G+ + G+W+FRGQ + F + E + D E Y+W+K+D E K +++++ +EGE Sbjct: 195 VNQPEFRAVLGEVKLCDKMAQFDAKKFAEMQPKKETPKKEKPAKEPKKEKEEKKKAAPTPAPAPEDDLDESEKALAAEPKSKDPYAHLPKSSFIMDEFKRKYSNEDT--LTVALPYFWEHFDKEGWSIWYAEYKFPEELTQAFMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDL-AFTLSEDWQIDYESYNWRKLDSGSEECK----TLVKEYFAWEGE 421
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.289e-20 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D + E + V + F+ G+A K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQELAFPLSPDWQVDYESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.289e-20 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + F+ G+A+ K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + F+ G+A+ K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDLAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + F+ G+A K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + F+ G+A K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + F+ G+A K FK Sbjct: 286 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEEAQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20 Identity = 67/242 (27.69%), Postives = 109/242 (45.04%), Query Frame = 3 Query: 6 VNIPNFRKILGEIKQ------------AESVPPVQSAKKPTQSXXXXXXXXXXXXXXXXXXXXXXXXXXDAGXXXXXXXXXXXXXXXXXXSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECY--DMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCF 689 VN P FR +LGE+K AE P ++ KK + ++ S I+DE+KR YSN T VA+ FW+ ++ EG+S+W+ +YK+ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRG + F + E + D E Y W+K+ E+ E M++++ +EGE K F Sbjct: 196 VNQPEFRAVLGEVKLCDKMAQFDAKKFAEVQPKKETPKKEKPAKEPKKKKKKKKKATPAPAPAPEDDLDESEKALAAEPKSKDPYAHLPKSSFIMDEFKRKYSNEDT--LTVALPYFWEHFEKEGWSIWYAEYKFPEELTQTFMSCNLITGMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHDL-AFTLSEDWQIDYESYTWRKL----ESDSEECRTMVKEYFAWEGEFKHVGKAF 430
BLAST of DC900348 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.899e-20 Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 240 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFE--GEALLDAKCFK 692 S +LDE+KR YSN T VA+ FW+ +D +G+SLW+ +Y++ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + + + D E Y W+K+D E + V + ++ G+A K FK Sbjct: 281 STFVLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAYQHVGKAFNQGKIFK 432 The following BLAST results are available for this feature:
BLAST of DC900348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900348 ID=DC900348; Name=DC900348; organism=Citrus sinensis; type=EST; length=873bpback to top |