DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.997e-13
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY------KPPSFEQPNID 297
            I+ + Y G + D+WS GVILY L+ G LPF++ ++  L+KKI    F +P + + S   L+  +L  +P+ R T+ ++ E+EWFK+        + PS+    ID
Sbjct:  191 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMID 295          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 4.997e-13
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY------KPPSFEQPNID 297
            I+ + Y G + D+WS GVILY L+ G LPF++ ++  L+KKI    F +P + + S   L+  +L  +P+ R T+ ++ E+EWFK+        + PS+    ID
Sbjct:  196 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMID 300          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 6.526e-13
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY------KPPSFEQPNID 297
            I+ + Y G + D+WS GVILY L+ G LPF++ ++  L+KKI    F +P + + S   L+  +L  +P+ R T+ ++ E+EWFK+        + PS+    ID
Sbjct:  146 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSXTMID 250          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.113e-12
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPWFSTSA--KKLISRILDPNPVTRITMAEVIENEWFKK 258
            ++ + YDG  AD+WSCGV LYV++ G  PFE+     N+    ++I    +K P +   SA  K+LI+RI   NP+ RITM E+  + WF K
Sbjct:  171 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNIRKTIQRIMSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLK 262          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KIN4_YEAST (Serine/threonine-protein kinase KIN4 OS=Saccharomyces cerevisiae GN=KIN4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.113e-12
Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE-------SNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 255
            ++ K Y+  KAD+WSCGVILY ++AGYLP+++        ++  LYK I +   K P + +   + L+ RIL PNP  RI +  +  + W K
Sbjct:  223 VSTKAYEARKADVWSCGVILYAMLAGYLPWDDDHENPTGDDIARLYKYITQTPLKFPEYITPIPRDLLRRILVPNPRRRINLQTIKRHVWLK 314          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY------KPPSFEQPNID 297
            I+ + Y G + D+WS GVILY L+ G LPF++ ++  L+KKI    F +P + + S   L+  +L  +P+ R  + ++ E+EWFK+        + PS+    ID
Sbjct:  196 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRAAIKDIREHEWFKQDLPKYLFPEDPSYSSTMID 300          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.480e-12
Identity = 31/86 (36.05%), Postives = 54/86 (62.79%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 267
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ + L  NP  R T+ +++++ W   G++
Sbjct:  224 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 309          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.480e-12
Identity = 31/86 (36.05%), Postives = 54/86 (62.79%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 267
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ + L  NP  R T+ +++++ W   G++
Sbjct:  224 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 309          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2A_DROME (Calcium/calmodulin-dependent protein kinase type II alpha chain OS=Drosophila melanogaster GN=CaMKII PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.480e-12
Identity = 67/257 (26.07%), Postives = 112/257 (43.58%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDS---------------IFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVN-EIISKIEEAASPLGFDV-----KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY 714
            G   D+W+CGVILY+L+ GY PF + +   LY +I KA   D+ SP W   +  AK LI+++L  NP  RIT AE +++ W  +  +  S       +D +                 +   +  SR+++ ++ E   V   T       S+S  L    + E + G V R T   SK P +  I+   +     +G        ++   K+  Q  +    G     T+I +   + +  E   +  + ++FHKFY
Sbjct:  192 GKSVDIWACGVILYILLVGYPPFWDEDQHRLYSQI-KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKEST------DSSSTTLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGNSQCSSARRQEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHKFY 441          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.480e-12
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA--DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKP 270
            G + D+WS GVILY+L++G  PF   N   ++ ++ K   DF S PW   S SAK L+ ++L  +P  RIT A+V+E+ W K G  P
Sbjct:  258 GKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIKGGEAP 344          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
AAPK1_PONAB4.997e-1335.245'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN4.997e-1335.245'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PIG6.526e-1335.245'-AMP-activated protein kinase catalytic subunit ... [more]
SAPK4_ORYSJ1.113e-1241.30Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
KIN4_YEAST1.113e-1238.04Serine/threonine-protein kinase KIN4 OS=Saccharomy... [more]
AAPK1_MOUSE1.899e-1234.295'-AMP-activated protein kinase catalytic subunit ... [more]
MARK2_RAT2.480e-1236.05Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN2.480e-1236.05Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
KCC2A_DROME2.480e-1226.07Calcium/calmodulin-dependent protein kinase type I... [more]
CDPKL_ARATH2.480e-1242.53Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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