DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SRK2A_ARATH (Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKK 258
            ++ + YDG  AD+WSCGV LYV++ G  PFE+     N     +KI    +K P +   S   K L+SRI   N + RIT+AE+ ++ WF K
Sbjct:  171 LSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIQKIMAVQYKIPDYVHISQDCKNLLSRIFVANSLKRITIAEIKKHSWFLK 262          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 255
            K Y+G + D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT+A++ ++ W +
Sbjct:  198 KEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLVVDPARRITIAQIRQHRWMR 279          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 30/91 (32.97%), Postives = 54/91 (59.34%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPP 273
            I  + YDG +AD+WSCGVIL+ L+ G LPF++ NL  L +K+ +  F  P +     + L+  +++  P  R+++ ++ ++ W+  G   P
Sbjct:  202 IKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWYLGGKHEP 292          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 30/91 (32.97%), Postives = 54/91 (59.34%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPP 273
            I  + YDG +AD+WSCGVIL+ L+ G LPF++ NL  L +K+ +  F  P +     + L+  +++  P  R+++ ++ ++ W+  G   P
Sbjct:  218 IKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWYLGGKHEP 308          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.215e-12
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 255
            K Y+G + D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT+A++ ++ W +
Sbjct:  198 KEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCETLIRRMLVVDPAKRITIAQIRQHRWMQ 279          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 7.215e-12
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDS 315
            K Y+G + D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT+A++ ++ W +        + P  D+    S
Sbjct:  198 KEYEGPQLDVWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCETLIRRMLVVDPAKRITIAQIRQHRWMQADPTLLQQDDPAFDMQGYTS 299          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: HSL1_YEAST (Probable serine/threonine-protein kinase HSL1 OS=Saccharomyces cerevisiae GN=HSL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.424e-12
Identity = 31/86 (36.05%), Postives = 53/86 (61.63%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKK 258
            +  + Y G  +D+WSCG++L+ L+ G+LPF + N+  L  K+    ++ P   S+ A+ LIS+IL  +P  RIT  E++++   KK
Sbjct:  286 VMGRPYHGGPSDVWSCGIVLFALLTGHLPFNDDNIKKLLLKVQSGKYQMPSNLSSEARDLISKILVIDPEKRITTQEILKHPLIKK 371          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.424e-12
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIF--KADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249
            G ++D+WS GVILY+L++G  PF   +   ++++I   K DF S PW   S SAK LI ++LD NP TR+T  EV+ + W
Sbjct:  212 GPESDVWSAGVILYILLSGVPPFWAESEPGIFRQILLGKLDFHSEPWPSISDSAKDLIRKMLDQNPKTRLTAHEVLRHPW 291          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.231e-11
Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKK---------GYKPPSFEQPNIDLDDVDSI 318
            K YDG  AD+WSCGV LYV++ G  PFE+     N     +KI    +  P +   S   + LI+RI   NP +RITM E+  + WF K         G     +E+P+  + +++ I
Sbjct:  192 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIQKILGVQYSIPDYVHISPECRDLITRIFVGNPASRITMPEIKNHPWFMKNIPADLMDDGMVSNQYEEPDQPMQNMNEI 309          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: PPK9_SCHPO (Protein kinase domain-containing protein ppk9 OS=Schizosaccharomyces pombe GN=ppk9 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.231e-11
Identity = 29/84 (34.52%), Postives = 52/84 (61.90%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWF 252
            I  + YDG   D+W CG++LY+++ G  PFE+  +  +  ++ K  +  P + S+SA  LI ++L   P +RI +AE++++ WF
Sbjct:  191 IQGRYYDGCDVDVWGCGILLYLMLVGEFPFEDVTISNVLSRVCKGIYTIPSFVSSSASDLIRQMLMVLPTSRIKVAEIMQHPWF 274          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
SRK2A_ARATH4.230e-1240.22Serine/threonine-protein kinase SRK2A OS=Arabidops... [more]
SIK1_HUMAN4.230e-1239.02Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
BRSK1_MOUSE4.230e-1232.97BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN4.230e-1232.97BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
SIK1_RAT7.215e-1239.02Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]
SIK1_MOUSE7.215e-1234.31Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]
HSL1_YEAST9.424e-1236.05Probable serine/threonine-protein kinase HSL1 OS=S... [more]
CDPK_SOYBN9.424e-1245.00Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
SAPK9_ORYSJ1.231e-1134.75Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
PPK9_SCHPO1.231e-1134.52Protein kinase domain-containing protein ppk9 OS=S... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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