DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2G_RAT (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus GN=Camk2g PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.231e-11
Identity = 65/261 (24.90%), Postives = 110/261 (42.15%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDV----------DSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVA-------------PSLYMVELRKSGG--DTLEFHKFY 714
            G   D+W+CGVILY+L+ GY PF + +   LY++I KA   DF SP W   +  AK LI+++L  NP  RIT  + +++ W  +     S       ++ +           +I    + SRN  V R+   P +P    A      ++ L    L +K  G VK+    +S   +    + +  A   +    +  N   + +  K  ++  + +  ++ E               P L   E    G   + ++FHKFY
Sbjct:  192 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI-KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVSRNFSVGRQSSAPASPAASAAGLAGQAAKSL----LNKKSDGGVKKRKSSSSVHLMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFY 447          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.607e-11
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 255
            K Y+G   D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT++++ +++W +
Sbjct:  197 KEYEGPHLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPYFMSEDCETLIRRMLVVDPTKRITISQIKQHKWMQ 278          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: PPK1_SCHPO (Serine/threonine-protein kinase ppk1 OS=Schizosaccharomyces pombe GN=ppk1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.607e-11
Identity = 31/87 (35.63%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   16 YDGAKADLWSCGVILYVLMAGYLPFEE-------SNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 255
            Y G +AD+WSCGVILY ++AGYLPF++        N+  LY+ I       P +F + A+ ++ +IL P+P  R+ M+ ++ + + +
Sbjct:  689 YAGTQADIWSCGVILYAMLAGYLPFDDDPHNPNGENVPRLYRYICSTPLIFPEFFKSKARDILKKILVPDPAKRVRMSAIMNHAYLR 775          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KIN1_YEAST (Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae GN=KIN1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.607e-11
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 1
Query:   16 YDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK--PPSFEQPNIDL 300
            Y G + D+WS GV+L+VL+ G +PF++ N   L++KI +   + P   S     L+S++L  +P  R T+ +V+E+ W  +G+   PPS+    + L
Sbjct:  320 YTGPEVDVWSFGVVLFVLVCGKVPFDDENSSVLHEKIKQGKVEYPQHLSIEVISLLSKMLVVDPKRRATLKQVVEHHWMVRGFNGPPPSYLPKRVPL 416          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.607e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA--DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKP 270
            G + D+WS GVILY+L+ G  PF   N   ++ +I K   DF   PW   S SAK L+ ++L  +P  RIT A+V+E+ W K G  P
Sbjct:  247 GKEIDIWSAGVILYILLCGVPPFWADNEEGVFVEILKCKIDFVREPWPSISDSAKDLVEKMLTEDPKRRITAAQVLEHPWIKGGEAP 333          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: STK6_RAT (Serine/threonine-protein kinase 6 OS=Rattus norvegicus GN=Aurka PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.099e-11
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1
Query:   28 KADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK-KGYKPPS 276
            K DLWS GV+ Y  + G  PFE       Y++I + +F  P + +  A+ LISR+L  N   R+T+AEV+E+ W K    KPP+
Sbjct:  302 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNSSQRLTLAEVLEHPWIKANSSKPPT 385          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: STK6_MOUSE (Serine/threonine-protein kinase 6 OS=Mus musculus GN=Aurka PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.099e-11
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1
Query:   28 KADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK-KGYKPPS 276
            K DLWS GV+ Y  + G  PFE       Y++I + +F  P + +  A+ LISR+L  N   R+T+AEV+E+ W K    KPP+
Sbjct:  300 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKPPT 383          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK3_ORYSJ (Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.099e-11
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDS 315
            ++ K YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +  P +   S+  ++L+S+I   +P  RIT+ E+ ++ WF K       E+   D  D D+
Sbjct:  172 LSRKEYDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDA 282          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK3_ORYSI (Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. indica GN=SAPK3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.099e-11
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDS 315
            ++ K YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +  P +   S+  ++L+S+I   +P  RIT+ E+ ++ WF K       E+   D  D D+
Sbjct:  172 LSRKEYDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDA 282          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 2.099e-11
Identity = 30/86 (34.88%), Postives = 53/86 (61.63%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 267
            K  DG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ + L  NP  R T+ +++++ W   G++
Sbjct:  224 KKIDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 309          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
KCC2G_RAT1.231e-1124.90Calcium/calmodulin-dependent protein kinase type I... [more]
SIK2_CHICK1.607e-1137.80Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
PPK1_SCHPO1.607e-1135.63Serine/threonine-protein kinase ppk1 OS=Schizosacc... [more]
KIN1_YEAST1.607e-1134.02Serine/threonine protein kinase KIN1 OS=Saccharomy... [more]
CDPKN_ARATH1.607e-1142.53Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
STK6_RAT2.099e-1140.48Serine/threonine-protein kinase 6 OS=Rattus norveg... [more]
STK6_MOUSE2.099e-1140.48Serine/threonine-protein kinase 6 OS=Mus musculus ... [more]
SAPK3_ORYSJ2.099e-1133.33Serine/threonine-protein kinase SAPK3 OS=Oryza sat... [more]
SAPK3_ORYSI2.099e-1133.33Serine/threonine-protein kinase SAPK3 OS=Oryza sat... [more]
MARK2_MOUSE2.099e-1134.88Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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