DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:1..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SRK2C_ARATH (Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana GN=SRK2C PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKK----IFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFE 282
            ++ K YDG  AD+WSCGV LYV++ G  PFE+ +    ++K    I KA +  P +   S   + L+SRI   NP  RIT+ E+  + WF K      +E
Sbjct:  171 LSTKEYDGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQYAIPDYVRVSDECRHLLSRIFVANPEKRITIEEIKNHSWFLKNLPVEMYE 270          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPKA_ORYSJ (Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 43/127 (33.86%), Postives = 62/127 (48.82%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKG--------------YKPPSFEQPNIDLDDVDSIFNES 330
            K YDG  AD+WSCGV LYV++ G  PFE+     N     ++I    +  P +   S   + LI+RI   NP TRI++ E+  + WF K               Y+ P  EQP   +D++  I  E+
Sbjct:  193 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIQRILGVQYSIPDYVHISPECRDLIARIFVANPATRISIPEIRNHPWFLKNLPADLMDDSKMSSQYEEP--EQPMQSMDEIMQILAEA 317          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKK 258
            ++ + YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +K P +   S   ++L+SRI   NP  RIT+ E+  + WF K
Sbjct:  171 LSRREYDGKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMK 262          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: PLK1_BOVIN (Serine/threonine-protein kinase PLK1 OS=Bos taurus GN=PLK1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 50/179 (27.93%), Postives = 85/179 (47.49%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY-----------KPPSFEQPNIDLDDVD----SIFNESMDSRNLVVERREEGPVA-----PLTMNAFELISTSQGLNLSSLFEKQMGLVKRE 477
            ++ KG+   + D+WS G I+Y L+ G  PFE S L   Y +I   ++  P   +  A  LI ++L P+P  R T+ E++ +E+F  GY            PP F      LD  +    ++ N+ M++      R +E PV      P+  +  +++     +N S   E+  GLV++E
Sbjct:  221 LSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKNNEYSIPKHINPVASSLIKKMLQPDPTARPTIHELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLNKGMENPMPERPREKEEPVVREASEPVDCHLSDMLQQLHSVNASKPSER--GLVRQE 396          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KIN1_ENCCU (Probable serine/threonine-protein kinase KIN1 homolog OS=Encephalitozoon cuniculi GN=KIN1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 32/89 (35.96%), Postives = 53/89 (59.55%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 267
            +  + Y G + D+WS GV+LY ++ G +PF++ ++  L  KI  ADFK     S  A +LI  ++   P +R+ +++VI +EW  KG K
Sbjct:  233 LQGQRYCGPEIDVWSLGVVLYAILCGCVPFDDEDVQGLQAKIMDADFKFCKTISREAMELIRGMIVAQPSSRMGLSQVIGSEWVNKGQK 321          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA--DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKG 261
            G + D+WS GVILY+L++G  PF   N   ++  I +   DF+S PW   S SAK L+ ++L  +P  RIT A+V+++ W ++G
Sbjct:  259 GKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDFESEPWPSVSNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREG 342          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.581e-11
Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA--DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS 276
            G + D+WS GVILY+L+ G  PF       + + I ++  DFK  PW   S +AK L+ ++L+P+P  R++ A+V+E+ W +   K P+
Sbjct:  235 GPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSETAKDLVRKMLEPDPKKRLSAAQVLEHSWIQNAKKAPN 323          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKK 258
            ++ + YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +K P +   S   ++L+SRI   NP  RIT+ E+  + WF K
Sbjct:  171 LSRREYDGKTADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIMSIQYKIPEYVHVSQDCRQLLSRIFVANPAKRITIREIRNHPWFLK 262          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPWFSTS--AKKLISRILDPNPVTRITMAEVIENEWFKK 258
            ++ + YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +K P +   S   + L+SRI   NP  RI+M E+  + WF K
Sbjct:  171 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLK 262          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11
Identity = 43/137 (31.39%), Postives = 67/137 (48.91%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPWFSTSA--KKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFE--QPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPL 387
            ++ K YDG  AD+WSCGV LYV++ G  PFE+     N      +I    +  P +   SA  + L+SRI   NP  RIT+ E+  + WF K       +  Q ++ L D+++      +   ++ E R+ G    L
Sbjct:  171 LSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKL 307          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
SRK2C_ARATH3.581e-1138.00Serine/threonine-protein kinase SRK2C OS=Arabidops... [more]
SAPKA_ORYSJ3.581e-1133.86Serine/threonine-protein kinase SAPK10 OS=Oryza sa... [more]
SAPK6_ORYSJ3.581e-1138.04Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
PLK1_BOVIN3.581e-1127.93Serine/threonine-protein kinase PLK1 OS=Bos taurus... [more]
KIN1_ENCCU3.581e-1135.96Probable serine/threonine-protein kinase KIN1 homo... [more]
CDPK_DAUCA3.581e-1140.48Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPK8_ARATH3.581e-1137.08Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
SAPK7_ORYSJ4.677e-1138.04Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]
SAPK5_ORYSJ4.677e-1138.04Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
SAPK1_ORYSJ4.677e-1131.39Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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