DC900345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_RAT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus GN=Camk2d PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_RABIT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Oryctolagus cuniculus GN=CAMK2D PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_PIG (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Sus scrofa GN=CAMK2D PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus GN=Camk2d PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Homo sapiens GN=CAMK2D PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_CHICK (Calcium/calmodulin-dependent protein kinase type II delta chain OS=Gallus gallus GN=CAMK2D PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KCC2D_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Bos taurus GN=CAMK2D PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKA---DFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEW 249 G D+W+CGVILY+L+ GY PF + + LY++I KA DF SP W + AK LI+++L NP RIT +E +++ W Sbjct: 192 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPW 271
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.677e-11 Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 22 GAKADLWSCGVILYVLMAGYLPF----EESNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDV 309 G D+WS GVI+Y+L+ G PF E+ +A+ + + DFK PW S SAK L+ ++LDP+P R+T +V+ + W + K PN+ L D+ Sbjct: 241 GPGVDVWSAGVIIYILLCGVPPFWAETEQGVALAILRGVL--DFKRDPWPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKK-----APNVPLGDI 335
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: TRIB1_HUMAN (Tribbles homolog 1 OS=Homo sapiens GN=TRIB1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 6.108e-11 Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 1 INNKG-YDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMD 336 +N G Y G AD+WS GV+LY L+ G PF +S+ AL+ KI + F P S A+ LI +L P R+T E++ + WF+ +P + D + + E D Sbjct: 254 LNTTGTYSGKAADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPEHISPKARCLIRSLLRREPSERLTAPEILLHPWFESVLEPGYIDSEIGTSDQIVPEYQEDSD 366
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SRK2F_ARATH (Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana GN=SRK2F PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.108e-11 Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEE----SNLMALYKKIFKADFKSPPW--FSTSAKKLISRILDPNPVTRITMAEVIENEWFKKG--YKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREE 369 ++ K Y+G AD+WSCGV LYV++ G PFE+ N+ ++I + P + S+ K L+SRI +P RIT+ E+ ++ WF KG PP E+ + +++ + + S +V+ EE Sbjct: 171 LSRKEYNGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSVHYTIPDYVRISSECKHLLSRIFVADPDKRITVPEIEKHPWFLKGPLVVPPEEEKCDNGVEEEEEEEEKCRQSVEEIVKIIEE 301 The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bpback to top |