DC900345

Overview
NameDC900345
Unique NameDC900345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:1..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MELK_HUMAN (Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 3.573e-19
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPP---SFEQPNIDLDDVDSIFNESMDSRN 345
            I  K Y G++AD+WS G++LYVLM G+LPF++ N+MALYKKI +  +  P W S S+  L+ ++L  +P  RI+M  ++ + W  + Y  P     + P I LDD D +   S+  RN
Sbjct:  180 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDD-DCVTELSVHHRN 296          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.950e-18
Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVD 312
            I  K Y G++AD+WS G++LYVLM G+LPF++ N+MALYKKI +  ++ P W S S+  L+ ++L  +P  RI+M  ++ + W  + Y  P   Q    L  +D
Sbjct:  180 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYEVPKWLSPSSILLLQQMLQVDPKKRISMRNLLNHPWVMQDYSCPVEWQSKTPLTHLD 283          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.560e-17
Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK----PPSFEQ---PNIDLD-DVDSIFNESM----DSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVK 471
            I+ K Y G + D+WS GVILYV++ G LPF++  + AL+KKI    +  P + S  AK L++R+L  NP+ RIT+ E++E+EWFK+       PP   +     ID+D DV S  + +M    D    V+E+      A       +  ST++ L+   L ++   LVK
Sbjct:  220 ISGKLYAGPEVDVWSSGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYLSPGAKHLLTRMLVVNPLNRITIHEIMEDEWFKQDMPDYLLPPDLSKIKTSKIDIDEDVISALSVTMGYDRDEIISVIEKANREAAAGGATPTNQSKSTNEVLDAYLLMKENHTLVK 388          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.660e-16
Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK----PPSFEQPNIDLDDVD 312
            I+ K Y G + D+WS GVILYV++ G LPF++  + AL+KKI    +  P + S  AK L++R+L  NP+ RIT+ E++E++WFK+       PP   +      DVD
Sbjct:  222 ISGKLYAGPEVDVWSAGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYLSAGAKHLLTRMLVVNPLNRITIHEIMEDDWFKQDMPDYLLPPDLSKNKNSKIDVD 329          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.076e-15
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = 1
Query:    1 INNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKK------GYKPPSF--EQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLG 549
            I+ K Y G + D+WSCGVILY L+ G LPF++ N+  L+KKI    +  P   S+ A+ LI R+L  +PV RIT+ E+ ++ WF+          PP    +   I+ + V  + N   D RN V+E          T+  +        L L + F    G ++ E + T+    N + +  E  ASP+G
Sbjct:  189 ISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSEARDLIPRMLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFD-RNQVLESLRNRTQNDATVTYY--------LLLDNRFRVPSGYLESEFQETTDSGSNPMRTP-EAGASPVG 369          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.088e-15
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 1
Query:   16 YDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY 264
            YDG KAD+WSCGVILY L+ G LPF++ N+  L  K+    F  PP+    A+ L++++L  +P  RI++ E+ E+ WF   +
Sbjct:  184 YDGQKADVWSCGVILYALLTGKLPFDDENIRRLLNKVKNGAFSMPPYIHKDAQDLLTKMLTVDPSKRISIKEIKEHPWFVSNF 266          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.339e-15
Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDLDD 306
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ R L  NPV R T+ +++++ W   G++      F +P +D+ D
Sbjct:  227 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEEELKPFVEPELDISD 328          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.339e-15
Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDLDD 306
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ R L  NPV R T+ +++++ W   G++      F +P +D+ D
Sbjct:  227 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 328          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 6.973e-15
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDLDD 306
            K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ R L  NP+ R T+ +++++ W   G++      F +P +D+ D
Sbjct:  250 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 351          
BLAST of DC900345 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.106e-15
Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:   10 KGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDV 309
            K YDG K D+WS GV+LYVL+ G LPF+ S L  L  ++    F+ P + ST  + LI  +L   P  R++M ++ +N+W ++G   P F++  ++ + V
Sbjct:  230 KEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTDCEYLIRHMLILEPSRRLSMEQICKNKWMRQGDPDPEFDRLIVECEQV 329          
The following BLAST results are available for this feature:
BLAST of DC900345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
MELK_HUMAN3.573e-1940.68Maternal embryonic leucine zipper kinase OS=Homo s... [more]
MELK_MOUSE3.950e-1840.38Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
SNF1_CANTR2.560e-1735.50Carbon catabolite-derepressing protein kinase OS=C... [more]
SNF1_CANAL1.660e-1640.74Carbon catabolite-derepressing protein kinase OS=C... [more]
KIN11_ARATH1.076e-1531.94SNF1-related protein kinase catalytic subunit alph... [more]
Y7165_DICDI4.088e-1542.17Probable serine/threonine-protein kinase DDB_G0277... [more]
MARK3_RAT5.339e-1536.27MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE5.339e-1536.27MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK3_HUMAN6.973e-1535.29MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
SIK3_DANRE9.106e-1537.00Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionDC900345 VSS Citrus sinensis cDNA clone VS28902 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900345 ID=DC900345; Name=DC900345; organism=Citrus sinensis; type=EST; length=1136bp
ATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGGTCTTGCGG
TGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGAAGAATCCA
ATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCT
CCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCC
TAATCCTGTGACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGT
TTAAGAAGGGATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTT
GATGATGTGGATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGT
TGTGGAGAGGCGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGT
TTGAGTTGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAA
AAGCAAATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCC
TGTTAACGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTT
TTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACT
GGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCC
TTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAAT
TTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGG
AAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGC
AGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTC
CAGCAAATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTT
ATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTC
GTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCAT
CTCAACGGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGT
CTCAGTCCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATG
GACCAGAAAATTCAATAAAAAGAATATATTGTAAAA
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