DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_CHLTE (Probable chaperone protein clpB 1 OS=Chlorobium tepidum GN=clpB1 PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 2.573e-87 Identity = 153/275 (55.64%), Postives = 214/275 (77.82%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDD--ETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQD AV++V++A++RSRAG+ D RPI SF+F+GPTGVGKTELA+ LA Y+F+ E+AL+RIDMSEYME H VSRL+GAPPGYVGYEEGGQLTE VRR+P++V+L DEIEKAH DVFN+ LQILDDGR+TDS+GRTV+F NT+IIMTSN+G+Q I + + E + A +K+++ + RPEF+NR+DE I+F PL R+ + IV +Q +R+++ +++ ++++D A+ L G+DP +GARP+KRV+Q+ + N L++ IL G+ Sbjct: 143 VVGQDEAVRAVSDAVKRSRAGMGDEKRPIGSFIFLGPTGVGKTELARTLAEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNIGAQLIQSEMEHLEGRDADAALAGLKEKLFQLLKQQVRPEFLNRIDEVILFTPLTRENLREIVTIQFNRIKETARRQRITLEISDEALMWLAKTGFDPAFGARPLKRVMQRQITNRLSEMILAGQ 417
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 7.488e-87 Identity = 153/275 (55.64%), Postives = 214/275 (77.82%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFP---KETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ AV +VA+AI+R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF E+A++RIDMSEYME+HA SRL+G+PPGYVGY+EGGQLTE VRR+PY+V+L DE+EKAH +VFN+ LQ+L+DGR+TDS+GR V F NTVIIMTSNVG+ + F +E Y+ +K +V++ + FRPEF+NR+DE IVF L+++ + IV L + ++QKR+ ++ + + +TD AI+ + + G+DP YGARP++R IQ+ +E+ L++ +LRG Sbjct: 513 VIGQSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRG 787
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.277e-86 Identity = 155/278 (55.76%), Postives = 216/278 (77.70%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF------PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV S+++A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF ++A++R+DMSE+MEKHAVSRL+GAPPGYVG+++GGQLTE VRR+PY+VILFDEIEKAH DVFN+ LQ+LDDG +TD++GRTV F NTVIIMTSNVG+Q + D+ F + + YET+++ +M + FRPEF+NRVD+ IVF L +D++ IV + ++++ R++++ + + VTD A + + GYDP YGARP+ R IQ+ VE+ L++ IL G Sbjct: 510 VIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQ---ELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.277e-86 Identity = 155/278 (55.76%), Postives = 216/278 (77.70%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF------PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV S+++A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF ++A++R+DMSE+MEKHAVSRL+GAPPGYVG+++GGQLTE VRR+PY+VILFDEIEKAH DVFN+ LQ+LDDG +TD++GRTV F NTVIIMTSNVG+Q + D+ F + + YET+++ +M + FRPEF+NRVD+ IVF L +D++ IV + ++++ R++++ + + VTD A + + GYDP YGARP+ R IQ+ VE+ L++ IL G Sbjct: 510 VIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQ---ELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.277e-86 Identity = 150/273 (54.95%), Postives = 214/273 (78.39%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+K V++A++RSR+G+ D +RP+ SF+F+GPTGVGKTEL KALA ++F+ AL+RIDMSEYMEKH++SRLIGAPPGY+GY++GG LTE VRRRPY VILFDE+EKAH D+FN+ LQILD+GR+TDSQG TV F NT+I++TSN+G++ ++N + E Y+ ++ VM R +F+PEF+NR+DE I+F L+R+ I IV++QL ++K + + + ++ ++A+ L GYDP++GARP+KR+IQ+ ++N LAK IL GE Sbjct: 569 VIGQDEAIKGVSDAVRRSRSGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKE----GEDTYK-VRDEVMQYVRAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLGSLKKILLQQNIILEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.668e-86 Identity = 157/278 (56.47%), Postives = 215/278 (77.34%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF------PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ+ AV S+++A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF E+A++R+DMSE+MEKHAVSRL+GAPPGYVG++EGGQLTE VRR+PY+VILFDEIEKAH DVFN+ LQ+LDDG +TD++GR V F NTVIIMTSNVG+Q + D+ F + YETI++ +M + FRPEF+NRVD+ IVF L +D++ IV + ++++ +R++++ + + VTD A + + GYDP YGARP+ R IQ+ VE+ L++ IL G Sbjct: 510 VIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQ---ELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 2.179e-86 Identity = 148/273 (54.21%), Postives = 215/273 (78.75%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A+K +++A++RSR+G+ D +RP+ SF+F+GPTGVGKTEL KALA ++F+ AL+RIDMSEYMEKH++SRLIGAPPGY+GY++GG LTE VRRRPY VILFDE+EKAH D+FN+ LQILD+GR+T+SQG TV F NT+I++TSN+G++ ++N ++ E Y+ +K VM R +F+PEF+NR+DE I+F L+R+ I IV++QL ++K + + + ++ ++A+ L GYDP++GARP+KR+IQ+ ++N LAK IL G+ Sbjct: 569 VIGQDEAIKGISDAVRRSRSGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTNSQGITVDFKNTIIVLTSNLGAEILVNQQED----EDTYK-VKDEVMQYVRAVFKPEFLNRLDEIILFHRLNRNNIYDIVKIQLGSLKKILLQQNIILEFNESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGK 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 2.845e-86 Identity = 155/279 (55.56%), Postives = 214/279 (76.70%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI-------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQD AV +VA+A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA +F EE+++RIDMSEYMEKH+ SRL+G+PPGYVGY+EGGQLTE VRR+PY+V+L DEIEKAH DVFN+ LQ+L+DGR+TDS+GRTV F NT++IMTSNVG+ + N+ DET ++ +K +VM + FRPEF+NR+DE IVF L++ ++ IV L D++ KR+ ++ + +++TDAA + G D YGARP++R IQ++VE+ L++ +LRG Sbjct: 510 VIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDET----QNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_ENTFA (Chaperone protein clpB OS=Enterococcus faecalis GN=clpB PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 2.845e-86 Identity = 155/272 (56.99%), Postives = 207/272 (76.10%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQD AV +V++A+ RSRAGL DP+RP+ SF+F+GPTGVGKTELAKALA +F++E+ +VRIDMSEYMEKHAVSRL+GAPPGYVGYEEGGQLTE VRR PY ++L DEIEKAH DVFN+ LQ+LDDGR+TDS+GR V F NTV+IMTSN+GSQ +L + P+ T E ++ +VM+ + F+PEF+NR+D+ I+F PL D + I+ ++ R+ +++ +++TD A + GY+P YGARP+KR I + VE LAK I+ G Sbjct: 573 VIGQDEAVDAVSDAVIRSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVLIMTSNIGSQLLL---EGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDTILFTPLSLDNVKGIIGKMTAQLAHRLEQQEIVLEITDEAKTWIAENGYEPAYGARPLKRFITREVETPLAKEIVSG 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 2.845e-86 Identity = 154/279 (55.20%), Postives = 215/279 (77.06%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL------NMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AVKSVA+A+ R+RAGL D +PI SF+F+GPTGVGKTELAK LA MF++E+ ++RIDMSEYMEK++VSRLIG+PPGYVGYEEGGQLTE VRR+PY+VILFDEIEKAHSDVFN+FLQI DDGR+TD++G T+ F N++IIMTSN+GS+++L N+D+ET K +VM+ + F+PEF+NR+D+ I+F+PL ++I I+ + L+ ++ ++ ++ +K+ + + A +++ GYDP YGARP+KR I+ +E +AK + GE Sbjct: 576 VVGQTEAVKSVADAVIRARAGLKDMSKPIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEET----------KDKVMNELKGRFKPEFLNRLDDIIMFKPLSINEIGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIAKMFISGE 844 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |