DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 2.845e-86 Identity = 154/271 (56.83%), Postives = 206/271 (76.01%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKM-KMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 V+GQD AV+ ++ AI+RSR+GLSDP RPI SFMF+GPTGVGKTEL KAL+ ++F+T+ A+VRIDMSE+MEKH+VS+L+GAPPGY+GYE G LTE +RRRPY+++L DEIEKAH DVFN+ LQ+LDDGR+TD+QGR V F NTVIIMTSN+GS I D + Y+T+K+ V++ FRPEF+NR+DE +VF PL + I +QL + R+ +R + +T+ A+ L +G+DP YGARP+KR+IQQY+EN L++ IL Sbjct: 572 VIGQDEAVRVISNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSDLIQKKFD-----ISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKIL 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STRAL (Chaperone protein clpB OS=Streptomyces albus G GN=clpB PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 4.853e-86 Identity = 150/275 (54.55%), Postives = 212/275 (77.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQ AV++V++A+ R+RAG++DP RP SF+F+GPTGVGKTELAKALA ++F+ E A++RIDMSEY EKH+V+RL+GAPPGYVGYEEGGQLTE VRRRPY+V+L DE+EKAH VF++ LQ+LDDGR+TD QGRTV F NT++++TSN+GSQY++ E E +++VM+ R F+PEF+NR+D+ ++F LD D+++ I LQ+ + +R+ADR++ + VT A+ L G+DP YGARP++R+IQ + + LAK IL GE + Sbjct: 571 LIGQSEAVQAVSDAV-RTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPGVFDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQYLVGSAPE--------EEKRRQVMEVVRSSFKPEFLNRLDDLVIFSALDEDELARIAGLQIAGLARRLADRRLSLDVTPEALAWLAKEGFDPAYGARPLRRLIQTAIGDRLAKEILAGEVR 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 6.339e-86 Identity = 154/275 (56.00%), Postives = 213/275 (77.45%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETA---YETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ AV S+++A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF ++A++R+DMSE+MEKHAVSRL+GAPPGYVG+++GGQLTE VRR+PY+VILFDEIEKAH DVFN+ LQ+LDDG +TD++GR V F NTVIIMTSNVG+Q + + F T YE+I++ +M + FRPEF+NRVD+ IVF L +D++ IV + ++++ R++++ + + VT+AA + + GYDP YGARP+ R IQ+ VE+ L++ IL G Sbjct: 510 VIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQDQRFAGFGGATEGQDYESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 8.279e-86 Identity = 156/273 (57.14%), Postives = 207/273 (75.82%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL-NMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 VVGQD AV +V++A+ RSRAGL DP+RP+ SFMF+GPTGVGKTELAKALA +F+ ++ +VRIDMSEYMEK +VSRL+GA PGYVGYEEGGQLTE VRR PY+++LFDEIEKAH DVFN+ LQ+LDDGR+TD QGRTV F NT++IMTSN+GS+ +L +DD+ + Q+VM + F+PEF+NR+D+ I+F PL I IV +DR+ R+ DR++ ++++D A + + GY+P YGARP++R I +VE LAK I+ G Sbjct: 572 VVGQDAAVDAVSDAVLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTH----QQVMQLVQSRFKPEFLNRIDDIIMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLAKEIIAG 840
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 1.412e-85 Identity = 150/275 (54.55%), Postives = 212/275 (77.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ AV +V++A++R+RAG++DP+RP SF+F+GPTGVGKTELAKALA +MF+ + A+VRIDMSEY EKHAV+RL+GAPPGYVGY++GGQLTE VRRRPY V+LFDE+EKAH DVF++ LQ+LD+GR+TD QGRTV F NTV+I+TSN+G+ K +MDA + F+PEF+NR+D+ ++F PL ++Q++ IV +Q+ ++ +R+A R++ + V+D+A L GY+P YGARP++R+IQQ + ++LAK +L GE + Sbjct: 571 VVGQSEAVVAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSNLGA-----------------GGTKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVR 828
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 3.146e-85 Identity = 158/273 (57.88%), Postives = 206/273 (75.46%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AV +VAEA+ RSRAGL P +P SF+F+GPTGVGKTELAKALA +F+ E LVRIDMSEYME+H+V+RLIGAPPGYVG+EEGGQLTE VRRRPY+VILFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTVIIMTSN+G++++L + + + + VM R FRPE +NR+DE ++F PL +Q+ + RLQ+ V R+A+R + + VTDAA+ ++ SL YDP YGARP++R I++ V +L+K +++ E Sbjct: 572 VVGQAEAVSAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL----AGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEE 840
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 3.146e-85 Identity = 154/281 (54.80%), Postives = 212/281 (75.44%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 +VGQ+ AV +V++AI+R+R GL +P+RPIASF+F GPTGVGKTEL KA+ASY F +EEA+VR+DMSEYME+H VS+LIG+PPGYVGY EGGQLTE VR+RPY V+LFDEIEKAH DVFN+ LQIL+DGR+TDS+GRT+ F NT++IMTSN+GS+ I L + E +E Y ++ V + + FRPEF+NRVDE IVF+ L +D++ I + L + +R+ + + +QVT+ LL GY+P+YGARP++R + + +E+ LA+ +L G+ K Sbjct: 544 IVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIK 824
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2) HSP 1 Score: 315.464 bits (807), Expect = 4.109e-85 Identity = 160/273 (58.61%), Postives = 203/273 (74.36%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ+ AV +V+EAI RSRAGL P +P SF+F+GPTGVGKTELAKALA +F+ E LVRIDMSEYME+H+VSRLIGAPPGYVG+EEGGQLTE VRRRPY VILFDE+EKAH VFN LQ+LDDGR+TD QGRTV F N+VIIMTSN+G++++L + E + VM R FRPE +NR+DE +VF PL DQ+ + RLQ+ V R+A+R + + VTDAA+ + + YDP YGARP++R +++ V EL+K ++R E Sbjct: 571 VVGQNQAVNAVSEAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGAEHLL----AGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREE 839
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PORGI (Chaperone protein clpB OS=Porphyromonas gingivalis GN=clpB PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 5.366e-85 Identity = 158/274 (57.66%), Postives = 203/274 (74.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI----LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 V+GQD A+++VA+A++RSRAGL DP RPI SF+F+G TGVGKTELA+ALA +F+ E L RIDMSEY EK + +RLIGAPPGYVGY+EGGQLTE +RR+PY+V+LFDEIEKAH DVFNV LQ+LDDGR+TD++G V+F NT+IIMTSN+GS I N+ E TA VM + RPEF+NR+DE IVF PL +I IVRLQLD + +++AD + + T+A + GYDP +GARPVKRV+Q++V NEL+K +L Sbjct: 568 VIGQDEAIRAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELARALAELLFDDESMLTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDNKGHVVNFKNTLIIMTSNLGSDIIRERMQNLTAENRRSLTA--RTADEVMQLLKHTIRPEFLNRIDETIVFTPLTEKEIYEIVRLQLDGIVRQLADNDVVLHYTEAVVTFAAREGYDPQFGARPVKRVLQRFVLNELSKALL 839
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 5.366e-85 Identity = 153/281 (54.45%), Postives = 213/281 (75.80%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD AVK+++ AI+R+R GL +P+RPIASF+F GPTGVGK+ELAKALA+Y F +EEA++R+DMSE+ME+H VS+LIG+PPGYVGY EGGQLTE VRRRPY V+LFDEIEKAH DVFN+ LQIL+DGR+TDS+GRTV F NT++IMTSNVGS I + D + K+++Y IK V + + FRPEF+NR+DE IVF+ L + ++ I + L V +R+ +++++QVT+ + GY+P+YGARP++R I + +E+ +A+ +L E K Sbjct: 608 IIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIK 888 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |