DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_FUSNN (Chaperone protein clpB OS=Fusobacterium nucleatum subsp. nucleatum GN=clpB PE=3 SV=2) HSP 1 Score: 308.531 bits (789), Expect = 5.022e-83 Identity = 153/273 (56.04%), Postives = 204/273 (74.73%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V GQD A+KSVA+ + RS AGL DP+RP+ SF+F+GPTGVGKT LAK LA +F++E+ +VRIDMSEYM+K +V+RLIGAPPGYVGYEEGGQLTE +R +PY+VILFDEIEKAH DVFNV LQ+LDDGR+TD QGR V F NT+IIMTSN+GS +IL +D ++T +++V D + F+PEF+NR+DE I F+ LD I IV+L L ++ ++ + + ++ +D + L + YDP+YGARP++R IQ+ +E LAK IL E Sbjct: 571 VKGQDEAIKSVADTMLRSVAGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTSNIGSHFIL--EDPNLSEDT-----REKVADELKARFKPEFLNRIDEIITFKALDLPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 6.560e-83 Identity = 148/281 (52.67%), Postives = 208/281 (74.02%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD AV +V+ AI+R+R GL +P+RPIASF+F GPTGVGKTEL KALASY F +E +++R+DMSEYME+H VS+LIG+PPGYVGY EGG LTE VR++PY VILFDEIEKAH D+FN+ LQIL+DGR+TD++GRT+ F NT++IMTSN+GS+ I L + E+ Y ++ V + + FRPEF+NR+DE IVF+ L +D++ I L L+ V RI + +++ VT+ + L GY+P+YGARP++R + + +E+ LA+ +L G+ K Sbjct: 514 IIGQDEAVIAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCLE (Chaperone protein clpB OS=Mycobacterium leprae GN=clpB PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 1.119e-82 Identity = 146/273 (53.48%), Postives = 213/273 (78.02%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AV +V++A++RSRAG++DP+RP SF+F+GPTGVGKTELAKALA ++F+ + A+VR+DMSEY EKH+V+RL+GAPPGY+G+++GGQLTE VRRRPY V+LFDE+EKAHSDVF+V LQ+LD+GR+TD QGRTV F NT+ I+TSN+GS +++VM A R +F+PEF+NR+D+ ++F L+ +++ IV +QL+++ KR+A R+++++V+ A + L G+DP YGARP++R++QQ + ++LAK +L GE Sbjct: 572 VVGQKKAVHAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKALADFLFDDQRAMVRVDMSEYGEKHSVARLVGAPPGYIGHDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDVLLQVLDEGRLTDGQGRTVDFRNTIPILTSNLGS-----------------GGSEEQVMAAVRSVFKPEFINRLDDVLIFDGLNPEELVRIVDIQLEQLGKRLAQRRLQLEVSLPAKRWLAQHGFDPVYGARPLRRLVQQAIGDQLAKMLLAGE 827
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.461e-82 Identity = 150/273 (54.95%), Postives = 208/273 (76.19%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ AV +V++A++RSRAG+SDP+RP +FMF+GPTGVGKTELAKALA ++F+ E A+VRIDMSEY EKH V+RLIGAPPGYVGYE GGQLTE VRRRPY V+LFDEIEKAH DVF+V LQ+LD+GR+TD GRTV F NT++I+TSN+GS ++V+ A R F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YGARP++R++QQ + ++LAK +L G+ Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS-----------------GGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQ 827
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.461e-82 Identity = 150/273 (54.95%), Postives = 208/273 (76.19%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ AV +V++A++RSRAG+SDP+RP +FMF+GPTGVGKTELAKALA ++F+ E A+VRIDMSEY EKH V+RLIGAPPGYVGYE GGQLTE VRRRPY V+LFDEIEKAH DVF+V LQ+LD+GR+TD GRTV F NT++I+TSN+GS ++V+ A R F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YGARP++R++QQ + ++LAK +L G+ Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS-----------------GGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQ 827
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.237e-81 Identity = 142/275 (51.64%), Postives = 205/275 (74.55%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD A+K++A+A++ SRAGL + +RP+ASF+F+GPTGVGKT L KALA ++F+T++A++R DMSE+ EKH ++RLIG+PPGY+GYEE G+LTE VRR+PYAV+LFDE+EKAH D+ N+ LQ+LD+G +TDSQGR V F +T+I+MTSN+GS ++ P T + VMD + + PEF+NR+D+ IVF L + IV ++LD VQ+R+ DR++ + VT+AA + L GY P YGARP+ R+IQ+ + N +A I++GE K Sbjct: 504 IIGQDEALKAIADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKHTIARLIGSPPGYIGYEESGELTEAVRRKPYAVLLFDELEKAHHDITNLLLQVLDEGFLTDSQGRKVDFRSTLIVMTSNLGSDILV-----ADPSTTVTPKSRDAVMDVVQKYYPPEFLNRIDDQIVFNKLSEKNLEDIVNVRLDEVQQRLNDRRIILTVTEAARKWLAEKGYSPAYGARPLNRLIQKRILNTMAMKIIQGEIK 773
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_WOLSU (Chaperone protein clpB OS=Wolinella succinogenes GN=clpB PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.237e-81 Identity = 145/270 (53.70%), Postives = 207/270 (76.67%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 VVGQD A+ ++A AI+R++AGLS+ +RPI SF+F+GPTGVGKT+ AK LA ++F++++ LVRIDMSEYMEKHA SRL+GAPPGYVGYEEGGQLTE +RR+PY+V+LFDEIEKAH DVFN+ LQ+LDDGR+TD++G TV F NT+II+TSN+ S I+ D KE +K + + F+PEF+NR+D+ I+F PL QI IV + + +++++ +R++ +++T +A + + +G+DP YGARP+KR + + VE+ LA+ IL Sbjct: 573 VVGQDEALHAIARAIKRNKAGLSENNRPIGSFLFLGPTGVGKTQSAKTLAKFLFDSDKNLVRIDMSEYMEKHAASRLVGAPPGYVGYEEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGVTVDFRNTIIILTSNIASDKIMENSD----KERRESAVKAEL----KRYFKPEFLNRLDDIIIFNPLGLAQIVEIVEIMFEGIREKLKERQITLELTQSAKEQIAEVGFDPVYGARPLKRALYEEVEDRLAELIL 834
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNPX (Chaperone protein clpB 2 OS=Synechococcus sp. (strain WH8102) GN=clpB2 PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.237e-81 Identity = 154/275 (56.00%), Postives = 205/275 (74.55%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V+GQ AV +VA AI+R+RAG+ DP RP+ SF+F+GPTGVGKTELAKALA+ +F+ EEALVR+DMSE+ME++A +RLIGAPPGYVGYEEGGQLTE VRRRPYAV+L DE+EKAH DVFN+ LQ+LDDGR+TDSQG TV F +TV++MTSN+ S IL + + ++Q+V A FRPEF+NR+DE I F+PL + IVRLQL + +A++ + ++V DA L G++P YGARP++RV+++ +EN LA +L F+ Sbjct: 606 VIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVIL---EHARSGSSDDAQLQQQVDAALSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDAVADSLARQGHEPEYGARPLRRVLRRQLENPLATQLLEERFR 877
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_HELHP (Chaperone protein clpB OS=Helicobacter hepaticus GN=clpB PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 2.756e-81 Identity = 144/275 (52.36%), Postives = 206/275 (74.91%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQD A+K++A AI+R++AGL+D RPI SF+F+GPTGVGKT+ AK LA ++F+ ++LVRIDMSEYMEKHAVSRL+GAPPGYVGYEEGG LTE +RR+PY+++LFDE+EKAH DVFN+ LQ+LDDGR+TDS+G +V F+NT+II+TSN+ S I+ + D+ + ++ V +A ++ F+PEF+NR+D+ +VF PL I+ IV + + KR ++ + + ++ A + + +G+D YGARP+KR + + VE+ LA ILR E K Sbjct: 572 VVGQDDAIKAIARAIKRNKAGLNDASRPIGSFLFLGPTGVGKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVLDDGRLTDSKGVSVDFSNTIIILTSNIASDKIMEIGDK--------QERQKAVKEALKMYFKPEFLNRLDDVVVFNPLGLADITQIVDIMFKSLAKRALEKGINVTLSQEAREHIAQVGFDSVYGARPLKRALYEEVEDRLADLILRDEIK 838
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HS104_SCHPO (Heat shock protein 104 OS=Schizosaccharomyces pombe GN=hsp104 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 8.018e-81 Identity = 159/277 (57.40%), Postives = 205/277 (74.01%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIAD--RKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V+GQ+ AV +VA AI+ SRAGLSDP++PIASF+F GP+G GKT L KALAS+MF+ E A++RIDMSEYMEKH+VSRLIGAPPGYVG+E GGQLTE +RRRPY+VILFDEIEKA +V V LQ+LDDGR+T QG+ V N VIIMTSN+G++Y L D+E+ + T ++ VM++ R FRPEF+NR+ ++F L R I +IV ++ VQKR+ R +K++V+D A LLGS GY P YGARP+ RVIQ V N +A IL G+ + Sbjct: 586 VIGQNEAVTAVANAIRLSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSRLIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQVVDAKNAVIIMTSNLGAEY-LTTDNESDDGKID-STTREMVMNSIRGFFRPEFLNRISSIVIFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNRVIQNQVLNPMAVLILNGQLR 860 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |