DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 9.153e-85 Identity = 147/273 (53.85%), Postives = 207/273 (75.82%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ A+++++ A++RSR+G+ D ++P SF+F+GPTGVGKTELAKALA ++F+ + AL+R DMSEYMEKH+VS+LIGAPPGYVGYE+GG+LTE VRRRPY VILFDEIEKA+ D+FN+ LQILD+GR+TDS G+ + F NT++I+TSN+G++ +L + ++++ VM + FRPEF+NR+DE I+F L RD I I+ +Q +QK +A RK+ + + A +L+ GYDP YGARP+KRVIQ+ ++N LAK +L GE Sbjct: 569 VIGQKDAIEAISNAVRRSRSGVQDTNKPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGN---------VDSVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQFSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGE 832
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 9.153e-85 Identity = 155/273 (56.78%), Postives = 208/273 (76.19%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD AV+ V++A+ R+RAG+ DP RPI SF+F+GPTGVGKTELAKALA MF++E+ ++RIDMSEYMEKH+VSRL+GAPPGY+GYEEGGQLTE VRR PY+++L DEIEKAH DVFN+ LQ+LDDGR+TDSQGR + F NTVIIMTSN+GS +L +E E + E ++ VM + F+PEF+NRVD+ I+F+PL I IV ++ +Q R+AD+++ + ++D A + YDP YGARP+KR I ++VE LA+ I+ G+ Sbjct: 576 VIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEE---GEISPE-LESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREIVSGK 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 9.153e-85 Identity = 153/281 (54.45%), Postives = 213/281 (75.80%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V+GQD AVK+++ AI+R+R GL +P+RPIASF+F GPTGVGK+ELAK+LA+Y F +EEA++R+DMSE+ME+H VS+LIG+PPGYVGY EGGQLTE VRRRPY V+LFDEIEKAH DVFN+ LQIL+DGR+TDS+GRTV F NT++IMTSNVGS I + D + K+++Y IK V + + FRPEF+NR+ E IVF+ L + ++ I + L V R+ ++++++QVT+ + GY+P+YGARP++R I + +E+ +A+ +L GE K Sbjct: 611 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIK 891
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 2.039e-84 Identity = 152/281 (54.09%), Postives = 213/281 (75.80%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD AV++++ AI+R+R GL +P+RPIASF+F GPTGVGK+ELAKALA+Y F +EEA++R+DMSE+ME+H VS+LIG+PPGYVGY EGGQLTE VRRRPY V+LFDEIEKAH DVFN+ LQIL+DGR+TDS+GRTV F NT++IMTSNVGS I + D + K+++Y IK V + + FRPEF+NR+DE IVF+ L + ++ I + L V +R+ +++++QVT+ + GY+P+YGARP++R I + +E+ +A+ +L E K Sbjct: 608 IIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 888
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAW (Chaperone protein clpB OS=Staphylococcus aureus (strain MW2) GN=clpB PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.543e-84 Identity = 152/274 (55.47%), Postives = 212/274 (77.37%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM + F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAS (Chaperone protein clpB OS=Staphylococcus aureus (strain MSSA476) GN=clpB PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.543e-84 Identity = 152/274 (55.47%), Postives = 212/274 (77.37%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM + F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAR (Chaperone protein clpB OS=Staphylococcus aureus (strain MRSA252) GN=clpB PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.543e-84 Identity = 152/274 (55.47%), Postives = 212/274 (77.37%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM + F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAC (Chaperone protein clpB OS=Staphylococcus aureus (strain COL) GN=clpB PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.543e-84 Identity = 152/274 (55.47%), Postives = 212/274 (77.37%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM + F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 7.749e-84 Identity = 154/272 (56.62%), Postives = 215/272 (79.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL-NMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILR 873 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LAS +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGYVG++EGGQLTE VRR PY+VIL DE+EKAHSDVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L N+ D E + +T ++ VMD+ F+PE +NR+D+ ++F+PL + +S IV L ++ R+ D+ + ++VT+ A + LG Y+P +GARP+KR +Q+ +E +A+ +++ Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKD---AGEISDDT-EKAVMDSLHAYFKPEILNRMDDIVLFKPLSVNDMSMIVDKILTQLNMRLLDQHISIEVTEEAKKWLGEEAYEPQFGARPLKRFVQRQIETPIARMMIK 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 7.749e-84 Identity = 154/272 (56.62%), Postives = 215/272 (79.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL-NMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILR 873 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LAS +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGYVG++EGGQLTE VRR PY+VIL DE+EKAHSDVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L N+ D E + +T ++ VMD+ F+PE +NR+D+ ++F+PL + +S IV L ++ R+ D+ + ++VT+ A + LG Y+P +GARP+KR +Q+ +E +A+ +++ Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKD---AGEISDDT-EKAVMDSLHAYFKPEILNRMDDIVLFKPLSVNDMSMIVDKILTQLNMRLLDQHISIEVTEEAKKWLGEEAYEPQFGARPLKRFVQRQIETPIARMMIK 841 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |