DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PARUW (Chaperone protein clpB OS=Protochlamydia amoebophila (strain UWE25) GN=clpB PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 7.749e-84 Identity = 155/273 (56.78%), Postives = 206/273 (75.46%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ+ AV +V+EAI+RSR+GLSDP+RP+ F+F+GPTGVGKTELAKALA +FN +EAL+R+DMSEYMEKH VS+LIG+PPGY+GYEEGGQLTE +RRRPYAV+LFDEIEKAH DVFN+ LQ+ DDGR+TDS+GR V+ N + IMTSN+GS +L ++ + A + I + + FRPEF+NR+D+ + F PL + IV +QL+ + KR+ DR +++ T A+ L GYDP++GARP+KR IQQ V N+L+ IL G+ Sbjct: 571 VVGQEIAVSAVSEAIRRSRSGLSDPNRPMGVFLFLGPTGVGKTELAKALAFQLFNQDEALIRLDMSEYMEKHTVSKLIGSPPGYIGYEEGGQLTEALRRRPYAVVLFDEIEKAHPDVFNILLQVFDDGRLTDSKGRVVNCKNALFIMTSNIGSDLLLEKMEQN-KQGLAKDEIMLVLDPVIKKHFRPEFINRLDDILPFVPLREHDMEKIVVIQLNLLAKRLKDRDVELMWTPQALAHLAKEGYDPHFGARPLKRYIQQEVINQLSTAILEGK 842
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 1.012e-83 Identity = 150/275 (54.55%), Postives = 211/275 (76.73%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKET---AYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ AV S+++A++R+RAGL DP RPI SF+F+GPTGVGKTELA+ALA MF ++A++R+DMSE+MEKHAVSRL+GAP GYVG+++GGQLTE VRR+PY+VILFDEIEKAH DVFN+ LQ+LDDG +TD++GRTV F NT+IIMTSNVG+Q + + F + YETI++ ++ + FRPEF+NRVD+ IVF L ++++ IV + ++++ R++++ + + VTD A + GYDP YGARP+ R IQ+ +E+ L++ IL G Sbjct: 510 VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDG 784
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAN (Chaperone protein clpB OS=Staphylococcus aureus (strain N315) GN=clpB PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 1.012e-83 Identity = 152/274 (55.47%), Postives = 211/274 (77.01%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTNLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STAAM (Chaperone protein clpB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpB PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 1.012e-83 Identity = 152/274 (55.47%), Postives = 211/274 (77.01%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK+LA+ +F++E+ ++RIDMSEYMEKHAVSRLIGAPPGY+G++EGGQLTE VRR PY+VIL DE+EKAH+DVFNV LQILD+GR+TDS+GR+V F NT+IIMTSN+GSQ +L ET E+ ++ VM F+PE +NR+D+ ++F+PL D +S IV L ++ R+ ++++ ++V+D A LG Y+P YGARP+KR +Q+ +E LA+ +++ F Sbjct: 574 VVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKET---GEITESTEKAVMTNLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 1.012e-83 Identity = 145/275 (52.73%), Postives = 212/275 (77.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ AV +V++A++RSRAG++DP+RP SF+F+GPTGVGKTELAKA+A ++F+ + A++RIDMSEY EKH+V+RL+GAPPGYVGY++GGQLTE VRRRPY V+LFDE+EKAH DVF++ LQ+LD+GR+TD QGRTV F NT++I+TSN+G+ ++++MDA ++ F+PEF+NR+D+ ++F L +Q++SIV +Q+ ++ R+A R++ ++V+D+A L GYDP YGARP++R+IQQ + + LAK +L G + Sbjct: 573 VVGQLEAVTAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKAVAEFLFDDDRAMIRIDMSEYGEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILILTSNLGA-----------------GGTREQMMDAVKMAFKPEFVNRLDDVVIFDRLSPEQLTSIVDIQIKQLTDRLAGRRLNLRVSDSAKAWLAERGYDPAYGARPLRRLIQQAIGDTLAKELLAGNVR 830
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 1.322e-83 Identity = 151/273 (55.31%), Postives = 211/273 (77.29%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AV++V++A++R+RAG++DP+RP SFMF+GPTGVGKTELAKALA ++F+ + A+VRIDMSEY EKH+V+RL+GAPPGY+GY++GGQLTE VRRRPY VILFDEIEKAH DVF+V LQ+LD+GR+TD QGRTV F NT++I+TSN+GS +++VM A R F+PEF+NR+D+ I+F L+ ++ IV +QL ++QKR+A R++ ++V+ A Q L G+DP YGARP++R++QQ + ++LAK +L G+ Sbjct: 572 VVGQKRAVQAVSDAVRRARAGVADPNRPTGSFMFLGPTGVGKTELAKALADFLFDDKRAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLGS-----------------GGSEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVQIVDIQLAQLQKRLAQRRLTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGQ 827
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 2.254e-83 Identity = 149/281 (53.02%), Postives = 208/281 (74.02%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD AV +V+ AI+R+R GL +P+RPIASF+F GPTGVGKTEL KALASY F +E +++R+DMSEYME+H VS+LIG+PPGYVGY EGG LTE VR++PY VILFDEIEKAH D+FN+ LQIL+DGR+TD++GRT+ F NT++IMTSN+GS+ I L + E+ Y ++ V + + FRPEF+NR+DE IVF+ L +D++ I L L+ V RI + +++ VT+ Q L GY+P+YGARP++R + + +E+ LA+ +L G+ K Sbjct: 514 IIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 309.686 bits (792), Expect = 2.254e-83 Identity = 153/273 (56.04%), Postives = 209/273 (76.56%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQD AV++V++AI R+RAG+ DP+RP+ SF+F+GPTGVGKTELAKALA +F++EE +VRIDMSEYMEKH+VSRL+GAPPGYVGY+EGGQLTE VRR PY +IL DEIEKAH DVFN+ LQ+LDDGR+TDS+G V F NTV+IMTSNVGSQY+L+ E E + ET + VM R F+PEF+NR+D+ I+F+PL + I +I+ ++ R+ + ++++++++ + Y+P YGARP+KR + + +EN LAK I+ G+ Sbjct: 573 VVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMTSNVGSQYLLDNVGEN--GEISEET-TENVMSQLRAHFKPEFLNRIDDTILFKPLALEDIKNIILKMTSQLAHRLEEMEVELELSEEVKVWIAENAYEPAYGARPLKRYLTKVIENPLAKLIIGGK 842
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 3.846e-83 Identity = 155/281 (55.16%), Postives = 208/281 (74.02%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYI------LNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQD AV +V++AI+R+R GL +P+RPIASF+F GPTGVGKTEL KALASY F +EEA+VR+DMSEYME+H VS+LIG+PPGYVGY EGGQLTE VRRRPY V+LFDEIEK H DVFN+ LQIL+DGR+TDS+GRTV F NT++I+TSNVGS+ I L D E+ Y IK V + + FRPEF+NR+DE IVF+ L +D++ I + L V RI+++ ++++VT L + GY+P YGARP++R + + +E+ L++ L + K Sbjct: 511 IIGQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIK 791
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 3.846e-83 Identity = 153/273 (56.04%), Postives = 208/273 (76.19%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQD AV++V++AI R+RAG+ DP+RP+ SF+F+GPTGVGKTELAKALA +F++EE +VRIDMSEYMEKH+VSRL+GAPPGYVGY+EGGQLTE VRR PY +IL DEIEKAH DVFN+ LQ+LDDGR+TDS+G V F NTV+IMTSNVGSQY+L+ E E + ET + VM R F+PEF+NR+D+ I+F+PL + I +I+ ++ R+ + +++++++ + Y+P YGARP+KR + + +EN LAK I+ G+ Sbjct: 573 VVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMTSNVGSQYLLDNVGEN--GEISEET-TENVMSQLRAHFKPEFLNRIDDTILFKPLALEDIKNIIVKMTSQLSHRLEEMDVQLELSEEVKVWIAENAYEPAYGARPLKRYLTKVIENPLAKLIIGGK 842 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |