DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIC (Chaperone protein clpB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpB PE=3 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 3.369e-79 Identity = 145/274 (52.92%), Postives = 203/274 (74.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQD A++ V+EA+QRSRAG++DP+RPI +F+F+GPTGVGKTE AKALA ++F+ A+ RIDMSEYME H+V+RLIGAPPGYVGY+EGGQLTE VRRRPY++ILFDEIEKA+ +VFN+FLQILD+GR+TD +GR V F NTVII+TSN+GS+ + + E ++QR+ + F+PEF+NR+DE I+F + I I +QL+ ++++ + + + T+ + G+D YGARP+KR+IQ+ V N L++ IL G+F Sbjct: 575 VIGQDHALRLVSEAVQRSRAGIADPNRPIGTFLFLGPTGVGKTETAKALAEFLFDDVNAMTRIDMSEYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVIILTSNIGSEI---LGSSEYTSEEKERLVEQRL----KKHFKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTNELKDYVSKAGFDAEYGARPLKRLIQREVGNALSRYILDGKF 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPE_BACSU (ATP-dependent Clp protease ATP-binding subunit clpE OS=Bacillus subtilis GN=clpE PE=1 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 4.400e-79 Identity = 143/275 (52.00%), Postives = 206/275 (74.91%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVG-----SQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 V+GQ+ AV+ VA+A++RSRAGL +RP+ SF+F+GPTGVGKTEL+K LA +F T++A++R+DMSEYMEKHAVS++IG+PPGYVG+EE GQLTE VRR PY+++L DEIEKAH DV ++FLQI++DGR+TDSQGRTVSF +TVIIMTSN G ++ DD ++T ++D+ + F+PEF+NR D I F+ L+++ + IV L L +++ +A+R + + VTD A + + LGY P++GARP++R IQ++VE+E+ +L Sbjct: 411 VIGQEAAVQKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAGAGEKQTKVGFQSDDSVIEEQT--------LIDSLSMFFKPEFLNRFDSIIEFRSLEKEHLVKIVSLLLGELEETLAERGISLNVTDEAKEKIAELGYHPSFGARPLRRTIQEWVEDEMTDLLL 677
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_HELPY (Chaperone protein clpB OS=Helicobacter pylori GN=clpB PE=3 SV=2) HSP 1 Score: 293.123 bits (749), Expect = 2.184e-78 Identity = 144/276 (52.17%), Postives = 207/276 (75.00%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQR-VMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ+ A+K++A+AI+R++AGLSD ++PI SF+F+GPTGVGKTE AKALA ++F++++ L+RIDMSEY+EKHA+SRLIGA PGYVGYEEGGQLTE VRR+PY+V+L DE+EKAH DVFN+ LQ+LD+G +TDS+G V F NT++I+TSNV S +L +E E KQ+ + ++ R F+PEF+NR+DE I F LD + +IV + + +QK+ +R + + + + A +L+ G+D YGARP+KR + + VE++LA+ IL + K Sbjct: 570 VVGQEKAIKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYLEKHAMSRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNVASGALL--------EENLSEAEKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAVINIVGILFENIQKKALERGINITLDEEAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKVK 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_STRMU (Chaperone protein clpB OS=Streptococcus mutans GN=clpB PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 2.852e-78 Identity = 143/275 (52.00%), Postives = 198/275 (72.00%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILN--MDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 +VGQD AV+ V++AI RSRAG+ +P RPI SF+F+GPTGVGKT LAK LA +F +E +VR+DMSEYMEKHAVSRL+G PPGYVGYEEGGQLTE VR+R Y+++L DEIEKAH DVFN LQ+LD+GR+TDS+GRT+ F NT++IMTSN+GS IL D E Y +V+D FRPEF+NR+DE ++F L ++ +V++ + +Q R+ ++ + + +T++ LL G+D +GARP++R I Q +EN LA +++ + Sbjct: 568 IVGQDQAVQKVSQAIIRSRAGIQNPKRPIGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYVGYEEGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSTNILQSLQDSGCITSEVRY-----KVLDELNHSFRPEFLNRIDETVLFNALSEKDMTGVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPLALYLIQNQ 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLP_TRYBB (Heat shock protein 100 OS=Trypanosoma brucei brucei GN=HSP100 PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 6.353e-78 Identity = 144/275 (52.36%), Postives = 206/275 (74.91%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKET--AYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V GQD AV+ VA+AI R+RAGLS P+ P ASF+F+GPTGVGKTEL KA+A+ +F+ E+ +VRIDMSEYME+H+VSRLIGAPPGY+G++EGGQLTE VRRRP+AV+LFDE+EKAH +V+NV LQ+LDDGR+TDS+GRTV F+NT+I+MTSN+GS+++LN P+ET +YE +++ V+ A R FRPE +NR+D+ +VF+ L + + +V + V +R+ + + D + G+D N GARP++R I++ + E+ + ++ E Sbjct: 568 VKGQDEAVERVADAIIRARAGLSRPNSPTASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDEGGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMTSNLGSEHLLN------PEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVDNLIAGVNERLKSSGFSVLLDDGVKDFILEHGHDANMGARPLRRWIEKNIVTEIGRMLIAKE 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HSP78_CANAL (Heat shock protein 78, mitochondrial OS=Candida albicans GN=HSP78 PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 8.298e-78 Identity = 136/273 (49.82%), Postives = 200/273 (73.26%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQD A+ +V++A++ RAGL+ +RPIASFMF+GPTG GKTEL K+LA ++FN + A+VR DMSE+ EKH +SRLIG+PPGYVGYEE G+LTE VRR+PY+V+LFDE EKAH D+ + LQ+LD+G +TDS G+ + F NT+I+MTSN+G Q IL D T+ +K +V++ R + PEF+NR+D+ +VF L + + I+ ++L + R+ D+++ +Q+TD A LL +GYDP YGARP+ RV+++ + + LA +++G+ Sbjct: 499 VVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVVLFDEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIG-QEILLADKNTYEDGHINSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRIILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQ 770
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CHLCV (Chaperone protein clpB OS=Chlamydophila caviae GN=clpB PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 3.153e-77 Identity = 143/275 (52.00%), Postives = 200/275 (72.73%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ A+ +V+++I+ +R GLSDP RP+ F+F+GPTGVGKTELAKALA +FN EEA+VR DM+EYMEKH+VS+LIG+PPGYVGYEEGG L+E +RRRPY+V+LFDEIEKA +VFN+ LQI D+G +TDS+ R V+ N + IMTSN+GSQ + + + + ET+ V + F PEF+NR+D+ + F PL+ + I IV +Q+ RV +R+ +R++ + D+ I L GYD ++GARP+KR+IQQ V L+K +L+G+ K Sbjct: 570 VVGQPFAISAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYCAKK-GSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDIVKIVGIQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKGDIK 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum GN=clpC PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 4.118e-77 Identity = 133/273 (48.72%), Postives = 202/273 (73.99%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF--PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILR 873 V+GQD AV S+ AI+RSR G+ DP+RP+ SF+F+GPTGVGKT LA+ +A MF E++L+++DMSEYMEK A ++++G+PPGYVG+EEGG LTE VRRRPY V+LFDEIEKAH D+ ++ LQIL+ GR+TDS GR + F NT+IIMTSN+G+ I + F Y IK+++ A + +PEF+NR+DE ++F+PL+++ +S I+ L+++++ R+ + +M + + D+ + L G+ P GARP++RV++QY+E+ LA+ +L+ Sbjct: 553 VIGQDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKIDAAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSFLVDKGHSPEMGARPLRRVVEQYLEDPLAEMLLK 825
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CHLTR (Chaperone protein clpB OS=Chlamydia trachomatis GN=clpB PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 4.118e-77 Identity = 146/277 (52.71%), Postives = 198/277 (71.48%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAY--ETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ A+ +V+++I+ +R GLSDP RP+ F+F+GPTGVGKTELAKALA +FN EEA++R DM+EYMEKH+VS+LIG+PPGYVGYEEGG L+E +RRRPY+V+LFDEIEKA +VFN+ LQI DDG +TDS+ R V+ N + IMTSN+GSQ + D K T E + V A + F PEF+NR+D+ + F PL + I IV +Q++RV R+ +RK+ + D+ + L GYD +GARP+KR+IQQ V L+K +L+G+ K Sbjct: 570 VVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQ---ELADYCTKKGTIVDKEAVLSVVAPALKNYFSPEFINRIDDILPFVPLTTEDIVKIVGIQMNRVALRLLERKISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CHLMU (Chaperone protein clpB OS=Chlamydia muridarum GN=clpB PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 4.118e-77 Identity = 146/277 (52.71%), Postives = 198/277 (71.48%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAY--ETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ A+ +V+++I+ +R GLSDP RP+ F+F+GPTGVGKTELAKALA +FN EEA++R DM+EYMEKH+VS+LIG+PPGYVGYEEGG L+E +RRRPY+V+LFDEIEKA +VFN+ LQI DDG +TDS+ R V+ N + IMTSN+GSQ + D K T E + V A + F PEF+NR+DE + F PL + I IV +Q++RV R+ +R++ + D+ + L GYD +GARP+KR+IQQ V L+K +L+G+ K Sbjct: 570 VVGQPFAITAVSDSIRSARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLFNKEEAMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQ---ELADYCAKKGTIVDKEAVLSVVAPALKNYFSPEFINRIDEILPFVPLTTEDIVKIVGIQMNRVALRLLERRISLTWDDSVVLFLSEQGYDGAFGARPLKRLIQQKVVTMLSKALLKGDIK 843 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |