DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HSP98_NEUCR (Heat shock protein hsp98 OS=Neurospora crassa GN=hsp98 PE=1 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 8.037e-73 Identity = 135/277 (48.74%), Postives = 201/277 (72.56%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIA--DRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ AV+SV+ AI+ R+GLS+P++P SF+F GP+G GKT L KALA ++F+ +A++R DMSEY E+H++SR+IGAPPGYVG++ GGQLTE +RR+P++++LFDE+EKA +V V LQ++DDGR+TD QGR V N +++MTSN+G++Y+ + + + T ++ VM+A R F PEF+NR+ ++F L R +I IV L++ +QKR+ DR +K++V++ A LG+LGY P YGARP++RV+++ V N LA ILRG + Sbjct: 601 VVGQKEAVQSVSNAIRLQRSGLSNPNQP-PSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMSEYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDARNCIVVMTSNLGAEYLSRPNAKDGKID---PTTRELVMNALRNYFLPEFLNRISSIVIFNRLTRREIRKIVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPAYGARPLQRVLEKEVLNRLAVLILRGSIR 873
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPN (Chaperone protein clpB OS=Mycoplasma pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 8.037e-73 Identity = 136/272 (50.00%), Postives = 185/272 (68.01%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V GQD AV++V + R R L+DP+RPI SF+F+G TGVGKTELAK+LA +F+ E+A++R DMSEYMEKH+V++LIGAPPGYVGYE+ G LTE VRR+PY V+LFDEIEKAH DV N+ LQ+LDDG + DSQGR V+F NT+IIMTSN+GS YI+ E + M+A + FR EF+NR+DE + F L + + I+ LD++ +R+A + +K + + +D +GARP+KR I + + +AK IL G Sbjct: 431 VKGQDAAVETVVNTVMRGRVNLNDPNRPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKAMIRFDMSEYMEKHSVAKLIGAPPGYVGYEQSGLLTEAVRRKPYCVLLFDEIEKAHPDVTNILLQVLDDGTLKDSQGRLVNFKNTMIIMTSNLGSNYIM-------------ENKRDLAMEALKKHFRAEFINRIDEIVFFSVLQKTTVLEIITNLLDQLNQRLAKQNLKFTFDPKLNEFIYKSSFDEQFGARPIKRFIDRQIATLIAKQILEG 689
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGE (Chaperone protein clpB OS=Mycoplasma genitalium GN=clpB PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 1.371e-72 Identity = 136/275 (49.45%), Postives = 190/275 (69.09%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V GQD A+ +V + R R ++DP++PI SF+F+G TGVGKTELAK+LA +F+ E+AL+R DMSEYMEKH+V++LIGAPPGY+GYE+ G LTE VRR+PY+V+LFDEIEKAH DV NV LQ+LDDG + DSQGR V+F NT+IIMTSN+GS ++L K+ A +++K+ FRPEF+NR+DE + F L++D + SI+ L ++ KR+ + + + + +D +GARP+KR I V +AK IL+G+ K Sbjct: 431 VKGQDEAIDAVVNTVIRGRVNINDPNKPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKALIRFDMSEYMEKHSVAKLIGAPPGYIGYEQSGLLTEAVRRKPYSVLLFDEIEKAHPDVTNVLLQVLDDGTLKDSQGRVVNFKNTLIIMTSNLGSNFLLE-----GKKDLAIQSLKKH--------FRPEFINRIDEIVFFNVLEKDTVLSIINSLLAQLSKRLNKQNLFFNFDSNLTEFIYKSSFDQQFGARPIKRFIDHSVATLIAKYILQGKIK 692
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 2.338e-72 Identity = 135/278 (48.56%), Postives = 196/278 (70.50%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL---NMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ A+ S+++AI+RSRAGL RP+ SF+F+GPTGVGKT LAK L+ +MF +AL+RIDMSE+MEK AVSRLIGAPPGYVGYEEGG LTE VRR+PY++ILFDEIEKAH DV N+ LQ+L++G++TD+ GR V F+NT+II+TSN+G++ I+ ++ E IK ++ + F PEF+NR+D+ IVF L ++ + I+ + L + + I +R + + +++ A + G+D YGAR ++R IQ+ +E+ ++ IL G + Sbjct: 519 VVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIE 796
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGA (Chaperone protein clpB OS=Mycoplasma gallisepticum GN=clpB PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 3.160e-69 Identity = 131/275 (47.64%), Postives = 198/275 (72.00%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 + GQD A+K+V++A+ R RA ++DP+RPI SF+F+GPTGVGKTE+AK LA +F+ E+A+VRIDMSE+ME+H+V +LIG+PPGY+GY++ G L++ +R +PYAV+LFDEIEKAH DV N+ LQILDDG++TD+ R V+F NT+IIMTSN+G+++IL + P +T E +K+++ RPE +NR+DE I F+ L+ +S+I + L + RI +++ + ++ + G + +GARP+KR IQ+ VEN LAK I+ + + Sbjct: 430 IKGQDHAIKNVSDAVLRGRAQINDPNRPIGSFLFLGPTGVGKTEVAKKLAYCLFDNEKAMVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVLSDAIRTKPYAVVLFDEIEKAHPDVLNILLQILDDGQLTDNHNRLVNFKNTIIIMTSNIGAEHILANN----PAKT-IEELKRKI--------RPELLNRIDELITFKALNDKDLSAIAQKLLSDLSDRIKKQQINITFDKKIVENVVKHGSNTVFGARPLKRYIQREVENFLAKKIIENKLE 691
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: HS104_YEAST (Heat shock protein 104 OS=Saccharomyces cerevisiae GN=HSP104 PE=1 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 3.271e-66 Identity = 127/277 (45.85%), Postives = 187/277 (67.51%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIA--DRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ A+K+V+ A++ SR+GL++P +P ASF+F+G +G GKTELAK +A ++FN E+ ++R+D SE EK+AVS+L+G GYVGY+EGG LT ++ +PY+V+LFDE+EKAH DV V LQ+LDDGR+T QG+T+ +N ++IMTSN+G+++I + + T K VM A R FRPEF+NR+ ++F L R I IV ++L +++R D+ K+ +T A L GY + GARP+ R+IQ + N+LA IL+ E K Sbjct: 580 VVGQMDAIKAVSNAVRLSRSGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQEST-----KNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIK 850
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.052e-64 Identity = 115/157 (73.25%), Postives = 140/157 (89.17%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL 531 +VGQ AVK+V++A++RSRAG+SDP+RP SFMF+GPTGVGKTELAKALA ++F+ E A+VRIDMSEYMEKH+VSRL+GAPPGYVGYEEGGQLTE VRRRPY+V+L DEIEK H DVFN LQ+LDDGR+TD QGRTV F N ++IMTSN+GSQ+++ Sbjct: 573 LVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKVHPDVFNFLLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGSQFMV 729
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPA_RHOBL (ClpA homolog protein OS=Rhodopseudomonas blastica PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.591e-63 Identity = 128/277 (46.21%), Postives = 185/277 (66.79%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETF----PKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V GQD A+++++ +I+ +RAGL +P +PI +++F GPTGVGKTE+AK LA+ + L+R DMSEYMEKHAVSRLIGAPPGYVG+++GG LT+ V + P+ V+L DEIEKAH DV+N+ LQ++D G++TD GR V F N ++IMTSNVG+ +M E + T +T A F PEF NR+D I F PL R+ I +V + +++ ++ DR + +++T A LG GYD GARP+ RVIQ++++ LA+ +L G+ Sbjct: 490 VFGQDKAIEALSASIKLARAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATL---GVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGA---ADMAKEAIGFGRERRTGEDTA------AVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEELLFGK 754
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 3.742e-62 Identity = 131/267 (49.06%), Postives = 176/267 (65.92%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVG-SQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 V+G+D AVK VA+AI+R+RAG S+ +P SF+F+GPTGVGKTEL++ALA MF E AL IDMSEY ++ AVS+LIG GYVGYE+ LTE VRR PY+VIL DEIEKA V + LQ++DDGR+TD QG + F NT+IIMTSN G L+ D + +++ ++ FRPEF NR+D + F L + +S IV L L VQK +A + +K++VT AA L GYD GARP++RVI+Q + +++ Sbjct: 476 VIGEDEAVKMVAKAIRRNRAGFSEGDQPKGSFLFVGPTGVGKTELSQALALDMFGNENALFGIDMSEYADRTAVSKLIGTSAGYVGYEDNANTLTERVRRNPYSVILLDEIEKADPQVLTLLLQVMDDGRLTDGQGSVIDFRNTIIIMTSNAGFGNEALSGDKQ------RVQSLMDKLAPFFAQNFRPEFRNRLDNIVEFSHLTKQDLSQIVDLMLADVQKTLAKKSIKLEVTKAAKDWLMEQGYDEAMGARPLRRVIEQQIRDKV 736
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPC_STRP6 (Probable ATP-dependent Clp protease ATP-binding subunit OS=Streptococcus pyogenes serotype M6 GN=clpC PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 3.742e-62 Identity = 126/266 (47.37%), Postives = 175/266 (65.79%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 V+GQD AV +VA AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F +++A++R+DMSEY ++ AVS+LIG GYVGY++ LTE VRR PYA++L DEIEKA + + LQ+LDDGR+TD QG T++F NTVII TSN G F ++ ET + +MD FRPEF+NR + I F L ++ + IV L L V + A + + + + D A L LGY+ GARP++R+I+Q + + + Sbjct: 417 VIGQDEAVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMSEYNDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYAIVLLDEIEKADPQIITLLLQVLDDGRLTDGQGNTINFKNTVIIATSNAG-----------FGQQDT-ETSESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEVNQTTAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRI 670 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |