DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAR (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MRSA252) GN=clpL PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.422e-61 Identity = 123/266 (46.24%), Postives = 173/266 (65.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F +EAL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G +T ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDTEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAB (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 3.168e-61 Identity = 123/266 (46.24%), Postives = 173/266 (65.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F +EAL+R+DMSEY + A+S++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G N D+ + +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG---FGNGTDQEY----------DDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAW (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MW2) GN=clpL PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAS (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MSSA476) GN=clpL PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAN (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain N315) GN=clpL PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAM (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpL PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAAC (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain COL) GN=clpL PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain NCTC 8325) GN=clpL PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPL_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain USA300) GN=clpL PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.204e-60 Identity = 121/266 (45.49%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ-LTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENEL 855 ++GQD AV+ V+ AI+R+RAG D +RPI SF+F+GPTGVGKTELAK LA +F ++AL+R+DMSEY + AVS++IG GYVGY++ LTE VRR PY+VILFDEIEKA+ + + LQ++DDG +TD QG ++F NT+II TSN G + ++ +M + FRPEF+NR + + F LD+D + IV L LD VQ + + + M V+ A L GYD GARP++R+++Q V +++ Sbjct: 422 IIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF-------------GNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKI 674
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 8.627e-59 Identity = 120/272 (44.12%), Postives = 171/272 (62.87%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V GQD A++++ EAI+ +RAGL H+P+ SF+F GPTGVGKTE+ L+ + L+R DMSEYME+H VSRLIGAPPGYVG+++GG LT+ V + P+AV+L DEIEKAH DVFN+ LQ++D+G +TD+ GR F N V++MT+N G + + E ++ M+ + IF PEF NR+D I F L D I +V + +Q ++ + + ++V+ A L GYD GARP+ RVIQ ++ LA +L G Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR-----ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |