DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 8.259e-94 Identity = 164/274 (59.85%), Postives = 218/274 (79.56%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQD AV +VA AI+R+RAG+ DP RPI SF+F+GPTGVGKTELA+ALA+ +F+ E+AL+R DMSEYMEK+++SRLIGAPPGY+GYEEGGQL+E +RR PYAV+LFDE+EKAH DVFN+ LQ+LDDGR+TDSQGRT+ F N VI+MTSN+GSQ+IL M +E E + + ++ +V+ A R FRPEF+NR+D+ I+FQPL R Q+ IV +QL R+++ +A++ + + VT AA L GYDP YGARP+KR IQ+ +EN +A IL +F Sbjct: 582 VIGQDEAVVAVAAAIRRARAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTIDFCNAVIVMTSNIGSQFILEMGEE----EASLDAVELKVLGALRQHFRPEFLNRIDDTILFQPLSRGQLQQIVDIQLQRLKRLLAEQAIALNVTPAAAANLADRGYDPVYGARPLKRAIQRLIENPVASLILEQQF 851
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 1.079e-93 Identity = 168/272 (61.76%), Postives = 216/272 (79.41%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ AV+ VA AI+RSRAGLSDP++PI SF+F+GPTGVGKTEL K LA++MF++E+A+VRIDMSE+MEKH+V+RL+GAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F Y+ IK++VM+ FRPEF+NRVDE +VF PL +D I SI +QL+R+ R+ + +++V+D A++L+ +G+DP YGARP+KR IQQ +EN LAK IL G Sbjct: 570 VIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRI----QENFAM-LDYQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSDKALELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAG 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.409e-93 Identity = 170/273 (62.27%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +V+ AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL KALA++MF+++EA+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.409e-93 Identity = 170/273 (62.27%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +V+ AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL KALA++MF+++EA+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.409e-93 Identity = 170/273 (62.27%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +V+ AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL KALA++MF+++EA+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.409e-93 Identity = 170/273 (62.27%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +V+ AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL KALA++MF+++EA+VRIDMSE+MEKH+VSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F E Y +K+ V+ FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.840e-93 Identity = 167/274 (60.95%), Postives = 218/274 (79.56%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQ AV++V+ A++RSRAGL DP+RPI SF+F+GPTGVGKTEL KALA ++F+ E AL+RIDMSEYMEKH+V+RLIGAPPGYVGYEEGG LTE VRRRPY V+LFDEIEKAH DVFNV LQ+LDDGR+TD QGRTV F NT+IIMTSN+G++Y+ + + + ++ +VM+ R FRPEF+NRVDE I+F L R ++ +IV +QL+R++K ++DRK+ +++ D A L GYDP YGARP+KR IQ+YV++ LA+ +L+GEF Sbjct: 572 VVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTSNLGAEYLTALGE-----NEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEF 840
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 2.403e-93 Identity = 168/272 (61.76%), Postives = 215/272 (79.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 V+GQ AV+ VA AI+RSRAGLSDP++PI SF+F+GPTGVGKTEL K LA++MF++E+A+VRIDMSE+MEKH+V+RL+GAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS I E F Y+ IK++VM+ FRPEF+NRVDE +VF PL +D I SI +QL+R+ R+ + ++V+D A++L+ +G+DP YGARP+KR IQQ +EN LAK IL G Sbjct: 570 VIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRI----QENFAM-LDYQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKALELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAG 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 3.139e-93 Identity = 163/274 (59.49%), Postives = 217/274 (79.20%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV++V++AI+RSR+GL+DP++P SF+F+GPTGVGKTEL KALA ++F++E+ L+RIDMSEYMEKHAV+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ+I M + YE +K+ VM+ + FRPE +NR+DE +VF LD+ I SI ++QL ++KR+ + +++ V+DAA+ ++ G+DP YGARP+KR IQ +EN LAK +L G + Sbjct: 574 VVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQD------YEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNY 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 3.139e-93 Identity = 169/273 (61.90%), Postives = 218/273 (79.85%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AV+++++A++R+RAGL DP+RPI SF+F+GPTGVGKTEL KALAS++F + A+VRIDMSE+MEKH+VSRLIGAPPGYVGYEEGG LTE VRRRPY VILFDEIEKAH DVFNV LQ+LDDGR+TD QGRTV F NTVIIMTSN+G++Y++N+ + ET++ VM R FRPEF+NRVDE I+F L R+ + +IV +Q+ R+Q ++DRK+ +Q+ D A + L + GYDP YGARP+KRVIQ+ V++ LA+ IL G+ Sbjct: 570 VVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEYLVNLGE-----NDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGD 837 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |