DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 4.099e-93 Identity = 174/297 (58.59%), Postives = 220/297 (74.07%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKXXXXXXXXXXXXAFS-NGQLPQ 948 VVGQ AV +VA A++RSRAGL DP+RP+ SFMF+GPTGVGKTEL KALA Y+FN E A+VR+DMSEYMEKH+VSRLIGAPPGYVGY+EGG LTE VRRRPY V+LFDEIEKAH DVFNV LQ+LDDGR+TD QGRTV F NT+IIMTSN+GS++++N P+ ++++VM R FRPEF+NRVDE I+F L R ++ IV +Q R+QK + DRK+ + + AA L + G+DP YGARP+KRVIQ+Y+++ LA+ IL G+ K + NG+ PQ Sbjct: 571 VVGQAEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQ-----PEGEDTSAVREQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGRIVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQDPLAEMILAGDVKDGDNVAISSEGNVLTFNGKAPQ 862
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 5.354e-93 Identity = 166/273 (60.81%), Postives = 215/273 (78.75%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +VA AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL K+LA ++F++E ALVRIDMSE+MEKHAVSRL+GAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTVIIMTSN+GS I E F +Y +K VM+ FRPEF+NR+DE +VF PLD + I I +Q+ ++KR+A++ +++TD A+ L+ +G+DP YGARP+KR +QQ +EN LA+ +LRG+ Sbjct: 570 VIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDII----QEGF-GHLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGD 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 6.992e-93 Identity = 162/274 (59.12%), Postives = 220/274 (80.29%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQD AV +V+ A++RSRAGL+DP+RP SF+F+GPTGVGKTEL KALA ++F+TEEALVRIDMSE+MEKH+V+RLIGAPPGYVG+EEGG LTE +RR+PY+V+L DE+EKAH DVFN+ LQ+L+DGR+TDS GRTV F NTV++MTSN+GS I + + E + VMDA FRPEF+NR+DE +VF+PL R+QI+ I +QL R++KR+A+R++ ++++ A+ L ++G+DP YGARP+KR IQ+++EN LA+ IL G+F Sbjct: 570 VIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQELAGDR-------EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFDPVYGARPLKRAIQRWIENPLAQLILAGKF 836
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 6.992e-93 Identity = 167/274 (60.95%), Postives = 216/274 (78.83%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV+ V++AI+RSRAGL+DP RP SF+F+GPTGVGKTEL +ALA ++F++EE ++RIDMSE+MEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFNV LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ+I +M + YE IK+ V D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +GARP+KR IQQ +EN +AK IL G F Sbjct: 576 VVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGK------PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAIQQQIENPVAKLILEGVF 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 6.992e-93 Identity = 167/274 (60.95%), Postives = 216/274 (78.83%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV+ V++AI+RSRAGL+DP RP SF+F+GPTGVGKTEL +ALA ++F++EE ++RIDMSE+MEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFNV LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ+I +M + YE IK+ V D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +GARP+KR IQQ +EN +AK IL G F Sbjct: 576 VVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGK------PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAIQQQIENPVAKLILEGVF 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 9.132e-93 Identity = 167/273 (61.17%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD AV +++ AI+RSRAGL+DP+RPI SF+F+GPTGVGKTEL KALA+++F++++A+VRIDMSE+MEKHAVSRL+GAPPGYVGYEEGG LTE VRRRPY+VIL DE+EKAHSDVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN+GS +M E F Y+ +K VM FRPEF+NR+DE +VF PL R +S+I +QL R+ KR+ +R ++ +T A+++L G+DP YGARP+KR IQQ +EN LA+ IL G+ Sbjct: 570 VIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS----DMIQERF-GSLNYDEMKDIVMGIVSHNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGFDPVYGARPLKRAIQQEIENPLAQKILSGQ 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 9.132e-93 Identity = 167/274 (60.95%), Postives = 213/274 (77.74%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV +VA+AI+RSR+GL+DP++P SF+F+GPTGVGKTEL K LAS++F++++ L+RIDMSEYMEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFNV LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ I M + Y+ IK VM + FRPEF+NR+DE +VF LD I SI R+QL ++ R+A ++ +Q++D A+ LL G+DP YGARP+KR IQ +EN LAK IL G++ Sbjct: 574 VVGQDEAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAMATDD------YQVIKLAVMAEVKTQFRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEALALLSEAGFDPVYGARPLKRAIQAELENPLAKAILAGKY 841
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 9.132e-93 Identity = 166/274 (60.58%), Postives = 216/274 (78.83%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV+ V++AI+RSRAGL+DP RP SF+F+GPTGVGKTEL +ALA ++F++EE ++RIDMSE+MEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+VIL DE+EKAH DVFNV LQ+LDDGR+TD QGRTV F NTVI+MTSN+GSQ+I +M + YE IK+ V D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +GARP+KR +QQ +EN +AK IL G F Sbjct: 576 VVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGK------PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAVQQQIENPVAKLILEGVF 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 1.193e-92 Identity = 168/273 (61.54%), Postives = 217/273 (79.49%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQ AV+++++A++R+RAGL DP+RPI SF+F+GPTGVGKTEL KALAS++F + A+VRIDMSE+MEKH+VSRLIGAPPGYVGYEEGG LTE VRRRPY VILFDEIEKAH DVFNV LQ+LDDGR+TD QG TV F NTVIIMTSN+G++Y++N+ + ET++ VM R FRPEF+NRVDE I+F L R+ + +IV +Q+ R+Q ++DRK+ +Q+ D A + L + GYDP YGARP+KRVIQ+ V++ LA+ IL G+ Sbjct: 570 VVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVIIMTSNLGAEYLVNLGE-----NDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGD 837
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 2.657e-92 Identity = 165/274 (60.22%), Postives = 216/274 (78.83%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQ AV +VA A++RSRAGLSDP+RP SF+F+GPTGVGKTEL KALA ++F+TEEA+VRIDMSE+MEKH+V+RLIGAPPGYVGYEEGG LTE VRR+PY+V+L DE+EKAH DVFNV LQ+L+DGR+TDS GRTV F NTVI+MTSN+GS I + + E + VMDA FRPEF+NR+DE +VF+PL R+QI+ I +QL R++ R+ +R++ + ++ A+ L ++GYDP YGARP+KR IQ+++EN LA+ IL G+F Sbjct: 570 VIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDR-------EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKF 836 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |