DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 5.540e-90 Identity = 156/273 (57.14%), Postives = 220/273 (80.59%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ A+ +V++A++RSRAG+SDP+RP SF+F+GPTGVGKTELAKALA ++F+ E+A+VRIDMSEYMEK +VSRLIGA PGYVGYE+GGQLTE VRRRPY+V+LFDE+EKA+ ++F+V LQ+LDDGR+TD QGRTV F NT++IMTSN+GSQ+++N D + K K+ VMDA + F+PEF+NR+D+ ++F PL R+++ IV +Q+ V +R+ DR++ + VTD+A + L + GYDP YGARP++R++Q V ++LA+ +L G+ Sbjct: 581 VIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNEDMDADAK-------KKAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGK 846
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 5.540e-90 Identity = 169/276 (61.23%), Postives = 211/276 (76.45%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMD-DETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQD A+ VA+AI+R+RA +SDP+RPI +FMF+GPTGVGKTE KALA ++F+ E+A+VRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTE VRRRPY+V+L DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSNVGSQ IL+ E +E E +++R FRPEF+NR+DE ++F+ L QIS IV++QLD V +R+ +K+ + AI L GYDP YGARP+KRVIQ + N L+K I+ G+ K Sbjct: 572 VVGQDHALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKTETVKALAEFLFDDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTSNVGSQSILDPGMSENQKREAVNEALRER--------FRPEFLNRIDEIVMFKSLGEAQISGIVKVQLDLVAQRLRAKKIGIDFNQEAIDFLAKKGYDPIYGARPLKRVIQTELLNPLSKEIISGKVK 839
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 5.540e-90 Identity = 154/275 (56.00%), Postives = 218/275 (79.27%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 ++GQ AV++V++A++R+RAG++DP RP SF+F+GPTGVGKTELAKALA ++F+ E A+VRIDMSEY EKH V+RL+GAPPGYVGYEEGGQLTE VRRRPY+V+L DE+EKAH +VF++ LQ+LDDGR+TD QGRTV F NT++I+TSN+GSQ++ +T+ E K++V++ R F+PEF+NR+D+ +VF L+R ++ I +LQ+DR+ +R+A R+++++VTDAA+ L G DP YGARP++R++Q + + LAK IL GE K Sbjct: 574 LIGQSEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQFLSGHGPA--EPQTSEEEKKRQVLEVVRASFKPEFLNRLDDLVVFSALNRQELERIAKLQIDRLAQRLAQRRLRLEVTDAALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAKEILAGEVK 846
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 1.234e-89 Identity = 164/273 (60.07%), Postives = 210/273 (76.92%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD A +VA A+ R+RAGL D +PI SF+F+GPTGVGKTELAK LA +F++E+ +VRIDMSEYMEKHAVSRLIG PPGYVGYEEGGQLTE VRR PY+VILFDEIEKAH DVFN+FLQILDDGR+TD++G+TV F NT+IIMTSN+GS Y+L E E + I++ VM+ +L F+PEF+NRVD+ I+F+PL + I I+ + L V+ R+ +R + ++VTD A ++L GYDP YGARP+KR I +E E+AK I+ GE Sbjct: 577 VIGQDEATTAVANAVIRARAGLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGSGYLL----ENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGE 845
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 1.612e-89 Identity = 163/275 (59.27%), Postives = 211/275 (76.73%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ+ AV +V+EA+ R+RAGLSDP RPI SF+F+GPTGVGKTEL K LA +F+TEE +VR+DMSEYMEKHAV+RLIGAPPGYVGY+EGGQLTE VRR+PY+V+LFDE+EKAH DVFN LQILDDGR+TDS GRTV F NT+IIMTSN+GS Y+L D ++++VM+ R FRPEF+NRVDE ++F+PL QI+ IV L L R++ R+A+RK+ +++ D A + YDP YGARP++R +Q +E LA+ ++ GE + Sbjct: 575 VVGQEEAVDAVSEAVLRARAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNIGSPYML---DGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELR 846
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 2.105e-89 Identity = 164/284 (57.75%), Postives = 211/284 (74.30%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYIL-------NMDDETFP--KETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQD AV+ +++AI+R++AGLSD RP+ SF+ +GPTGVGKTELA+ LA ++FN E AL RIDMSEYMEKHA+SRLIGAPPGYVGY+EGGQLTE VRRRPY+V+LFDE+EKAH DVFN+FLQILDDGR+TD QGR V F NT+IIMTSN+GS++IL + D P + T +T+ +++ FRPEF+NR+DE ++F+ L R I I +QL V +R+ R +K++V DAA L GYD +GARP+KR IQ +EN LA+ IL G F+ Sbjct: 574 VVGQDEAVRVISDAIRRNKAGLSDTRRPLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGYDEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIMTSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILSGRFR 857
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 329.717 bits (844), Expect = 2.105e-89 Identity = 161/274 (58.76%), Postives = 213/274 (77.74%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQ AV++VA AI+R+RAGLSDP RPI SF+F+GPTGVGKTEL + LA ++F++EE +VRIDMSE+MEKH+V+RLIGAPPGYVGY++GG LTE VRR+PY+V+LFDE+EKAHSDVFN LQ+LD+GR+TD QGRTV F +TVIIMTSN+GS I + E +YE +K VM+ FRPEF+NR+DE IVF L + + I ++QL+R+++R+ R++ + V + AI L LGYDP +GARP+KR IQ Y+EN LA+ +L G++ Sbjct: 575 VVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLL------AEKSYEEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYDPLFGARPLKRAIQNYIENPLAQALLAGQY 842
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 3.591e-89 Identity = 165/275 (60.00%), Postives = 210/275 (76.36%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 VVGQ AV +V+ A++R+RAGL DP+RP+ SFMF+GPTGVGKTEL KALA Y+F+ E A+VRIDMSE+MEKH+V+RLIGAPPGYVGY+EGG LTE VRRRPY VILFDEIEKAH DVFNV LQ+LDDGR+TD QGRTV F NT+I+MTSN+GS+Y++N P+ ++++VM R FRPEF+NRVDE I+F L + ++ IV +Q R+ K + DRK+ + + AA L G+DP YGARP+KRVIQ+ V++ LA+ IL G K Sbjct: 571 VVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQ-----PEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVK 840
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 4.690e-89 Identity = 163/271 (60.15%), Postives = 216/271 (79.70%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILN-MDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGIL 870 V+GQ+ AV V++A+ R+RAG+ DP+RPI SF+F+GPTGVGKTELAK LA +F++EE ++RIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTE VRR+PY+VIL DEIEKAH +VFN+ LQ+LDDGR+TDSQGRTV F NTVIIMTSN+GS ++L+ ++D+ KE + ++ VM R FRPEF+NRVDE I+F+PL ++I IV + +Q R+ADR + +++TDAA + + G+DP YGARP+KR +Q+ VE +LA+ ++ Sbjct: 576 VIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLDGLEDDGSIKEES----RELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELI 842
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 4.690e-89 Identity = 162/273 (59.34%), Postives = 212/273 (77.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQD AVK V +AI R+R+G+ DP RPI SF+F+GPTGVGKTELAK LA +F++EE +VR+DMSEY E+H VSRL+GAPPGYVGYEEGGQLTE VRR+PY+V+LFDEIEKAH+DVFN LQILDDGR+TD+QGRTV F NTVIIMTSN+GS+++L D T E + + VM R FRPEF+NRVD+ ++F+PL QI IV LQ D +++R+A+R++ +++TDA +++ GYDP YGARP++R I VE + + +LRG+ Sbjct: 578 VIGQDEAVKLVTDAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNIGSEHLL--DGATAEGEIKPDA-RALVMGELRGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRQRLAERRITVELTDAGREVIAHQGYDPVYGARPLRRYISHEVETLVGRALLRGD 847 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |