CX043723

Overview
NameCX043723
Unique NameCX043723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:1934..2788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043723 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.983e-15
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = -2
Query:  348 LRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 842
            LREL NL ++ G+R     D++E +      +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  ++ + W++    GLK I   ++W  + +  LT
Sbjct:  524 LRELANLTLIMGNR----DDIDEMSGGNASVLTTVLKLIDRYDLYGQVAF-PKHHKQSDVPEIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNI-HLFSWPEHCRTYLT 683          
BLAST of CX043723 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.021e-14
Identity = 57/179 (31.84%), Postives = 86/179 (48.04%), Query Frame = -2
Query:  321 LRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRLLTLTGVYGFWK 842
            LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  IDP+  +  A+ L+    K  ++   W K    GLK I   ++W    K Y  ++ T    +  W+
Sbjct:  504 LRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALL----KLVSNKQLWAKCRQNGLKNI-HLFSWPEHCKTYLSKIATCKPRHPQWQ 676          
BLAST of CX043723 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.969e-14
Identity = 57/168 (33.93%), Postives = 81/168 (48.21%), Query Frame = -2
Query:  354 LRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 842
            LREL NL ++ G+R    +     A  +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A+ L+    K  A    W +    GLK I   ++W    K Y  R+
Sbjct:  503 LRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL----KLVAGKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664          
BLAST of CX043723 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = -2
Query:  348 LRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 842
            LREL NL ++ G+R    +     A  +  +  +ID+Y L G   +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP++ E  A+ L+    K  A+   W K    GLK I   ++W  + +  L+
Sbjct:  502 LRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKYDLYGLVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALL----KLVAEKHLWAKCRANGLKNI-HLFSWPEHCKSYLS 661          
The following BLAST results are available for this feature:
BLAST of CX043723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SPS2_CRAPL5.983e-1532.94Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_VICFA1.021e-1431.84Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS1_CITUN2.969e-1433.93Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS1_CRAPL3.878e-1432.53Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13A08-B15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043723 ID=CX043723; Name=CX043723; organism=Citrus sinensis; type=EST; length=855bp
CAAACTATAATGGGAATTGATGAGGGTGGAACACCCAAAAGTACAAACAA
TGCTGAGAAATGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAA
CGGGGGGAAAAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATT
CTCCACAACTCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCC
CTCAATGTCCATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCT
TACGGTACTTGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGA
CGATCAAGGTTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGT
CAGAAGCCTCTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCT
TCAGGCCACCCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCAC
TTCTCAAAGAAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGG
ATCAATGTGGTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCAC
CCTTGCAAGTTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACA
GTCAAGCCAAAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGT
ATCACAAATGTACCGGTACAATTCACCGTTCCTGACCCGATTCATCTGAG
ATGAGATCCATCGGAACTGGCCATTCAATTTGTATTGATCAATGAGGGAA
TACATCTTCTTCATTTCAGCCTGTTCTTCCAAGTCCTTGGACTCCTTTCT
CCTATCACCACCCACTACGACTAAGTTAACCAACTCACGTAGCTTAGCAT
TCTTT
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