DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.368e-22 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK +R ++ AR T+KYA Sbjct: 85 TPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164 HSP 2 Score: 47.7506 bits (112), Expect = 1.368e-22 Identity = 30/76 (39.47%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCS------AGPVADDMFHWQ---ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S R+ KELK L DPP S A + D + A I GP D+ +A G+F + I P YPF+PP V+F Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSF 83
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.393e-22 Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 262 VTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +T+++HPNI+S G+ICLDILK+ W+ A+T+ VLLS+ +LL PDDP +A+ +K + TA+ WT YA G Sbjct: 76 ITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155 HSP 2 Score: 51.6026 bits (122), Expect = 1.393e-22 Identity = 27/74 (36.49%), Postives = 37/74 (50.00%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPP---ASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + MA RI +E K++ + S V D + I GP D+P+ GG F++ I P YPF PPKV F Sbjct: 2 ANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRF 75
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.950e-21 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S+ A KR+ KEL+ L KD P AGP +++ +F W I GP D+P+A GVF + FP DYP PPK+ F Sbjct: 2 SKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTF 73 HSP 2 Score: 51.2174 bits (121), Expect = 1.950e-21 Identity = 23/76 (30.26%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 271 VFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 + HPNI NG +C+ IL +E+WSP ++ K+LLS+ S+L++PN + + +++ +R ++E Sbjct: 77 ILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFE 152
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.956e-21 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 262 VTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG*EG 507 +TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D + + A+ +T+ AM +G Sbjct: 74 LTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157 HSP 2 Score: 59.3066 bits (142), Expect = 1.956e-21 Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 51 QMASKRINKELKDLQKDPPASCSAGPVADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 Q + R+ KE K++Q++ A + DD +F W A I GPS++P+ GGVF ++ P YP +PP+V F Sbjct: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRF 73
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.544e-21 Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 456 ++ ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ D +Y Sbjct: 78 LSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142 HSP 2 Score: 60.4622 bits (145), Expect = 2.544e-21 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +KR+ EL L S SA PV D D+ +W I GP D+P++G F VS+ FP +YPF PP + F Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKF 77
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.547e-21 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 489 TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 72 TKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 HSP 2 Score: 52.373 bits (124), Expect = 2.547e-21 Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+ Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFK 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.547e-21 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 489 TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 72 TKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 HSP 2 Score: 52.373 bits (124), Expect = 2.547e-21 Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+ Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFK 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.547e-21 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 489 TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 72 TKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 HSP 2 Score: 52.373 bits (124), Expect = 2.547e-21 Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+ Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFK 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 65.0846 bits (157), Expect = 3.307e-21 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 256 PSV---TKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 498 PSV TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + +T D+ Y + R T YA G Sbjct: 69 PSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154 HSP 2 Score: 57.7658 bits (138), Expect = 3.307e-21 Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 3 Query: 63 KRINKELKDLQK-DPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 KR++KE Q D PV D DMFHW+A I GP+++P+ GG +++ IH YP PP V F+ Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQ 74
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.314e-21 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 489 TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 72 TKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 HSP 2 Score: 51.9878 bits (123), Expect = 3.314e-21 Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 AS+R+ KEL++++K + V + ++ WQ I+ P + P+ G F + I+FP +YPFKPPK+ F+ Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFK 71 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |