DC900339
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.295e-21 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F F P
Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 80 HSP 2 Score: 56.9954 bits (136), Expect = 4.295e-21 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 268 KVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486
++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK
Sbjct: 76 EMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.587e-21 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPV-ADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
MA +R+ KE K+L ++ P +AGP DD F W I GP +PF GG++ ++ FP DYP PP + F F P
Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHP 81 HSP 2 Score: 55.4546 bits (132), Expect = 5.587e-21 Identity = 26/84 (30.95%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 274 FHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486
FHPN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + + M++ DR +Y R +K
Sbjct: 79 FHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.587e-21 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F F P
Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 80 HSP 2 Score: 56.6102 bits (135), Expect = 5.587e-21 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 268 KVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486
++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK
Sbjct: 76 EMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.587e-21 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F F P
Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 80 HSP 2 Score: 56.6102 bits (135), Expect = 5.587e-21 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 268 KVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486
++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK
Sbjct: 76 EMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.587e-21 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F F P
Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 80 HSP 2 Score: 56.6102 bits (135), Expect = 5.587e-21 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 268 KVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486
++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK
Sbjct: 76 EMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 9.420e-21 Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 3
Query: 45 NSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281
+SQ KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFKPPKV F F P
Sbjct: 32 DSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHP 110 HSP 2 Score: 58.9214 bits (141), Expect = 9.420e-21 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 435
T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++
Sbjct: 105 TCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 63.5438 bits (153), Expect = 1.229e-20 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3
Query: 69 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
+ ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKF 74 HSP 2 Score: 57.3806 bits (137), Expect = 1.229e-20 Identity = 24/75 (32.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 262 VTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 447
+T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR
Sbjct: 75 ITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 63.5438 bits (153), Expect = 1.229e-20 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3
Query: 69 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
+ ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKF 74 HSP 2 Score: 57.3806 bits (137), Expect = 1.229e-20 Identity = 24/75 (32.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 262 VTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 447
+T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR
Sbjct: 75 ITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 63.5438 bits (153), Expect = 1.229e-20 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3
Query: 69 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
+ ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKF 74 HSP 2 Score: 57.3806 bits (137), Expect = 1.229e-20 Identity = 24/75 (32.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 262 VTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 447
+T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ DR
Sbjct: 75 ITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.595e-20 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 489
+T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ D+ +Y+ ++ +K+
Sbjct: 101 LTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175 HSP 2 Score: 55.8398 bits (133), Expect = 1.595e-20 Identity = 25/74 (33.78%), Postives = 43/74 (58.11%), Query Frame = 3
Query: 39 LRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
++++ SKR++KEL +L SA P +++F W TI GP ++ ++G + +S+ FP YP+ P V F
Sbjct: 27 VKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKF 100 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |