DC900339
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.910e-64 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR WTQKYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147 HSP 2 Score: 125.946 bits (315), Expect = 5.910e-64 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV DDMFHWQATIMGP+DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.910e-64 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR WTQKYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147 HSP 2 Score: 125.946 bits (315), Expect = 5.910e-64 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV DDMFHWQATIMGP+DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.910e-64 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR WTQKYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147 HSP 2 Score: 125.946 bits (315), Expect = 5.910e-64 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV DDMFHWQATIMGP+DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.709e-63 Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR WT+KYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 147 HSP 2 Score: 125.946 bits (315), Expect = 1.709e-63 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRINKEL+DL +DPPA CSAGPV DD+FHWQATIMGP DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.709e-63 Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147 HSP 2 Score: 125.946 bits (315), Expect = 1.709e-63 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV DDMFHWQATIMGP+DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.905e-63 Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSN SICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM
Sbjct: 71 TRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147 HSP 2 Score: 127.872 bits (320), Expect = 2.905e-63 Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRINKEL DL +DPPA CSAGPV DDMFHWQATIMGP+DSP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.940e-63 Identity = 62/77 (80.52%), Postives = 73/77 (94.81%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
TK++HPNINS+G+ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIA +YKTD+AKYE TA+ WT+KYA+
Sbjct: 72 TKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKYAV 148 HSP 2 Score: 123.25 bits (308), Expect = 4.940e-63 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
+SKRI KEL DL +DPPASCSAGPV DD++HWQA+IMGPSDSP+AGGVF +SIHFP DYPFKPPKV F
Sbjct: 3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.441e-63 Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
TK++HPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTD NPDDPLVPEIAH+YK DR KYE TA+ WT+KYA+
Sbjct: 71 TKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147 HSP 2 Score: 120.168 bits (300), Expect = 6.441e-63 Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVA 257
M+ KRINKEL DL +DPP+SCSAGPV DD++HWQA+IMGP DSP+AGGVF +SIHFP DYP KPPK+A
Sbjct: 1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIA 68
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.862e-62 Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR +Y AR WTQKYAM
Sbjct: 71 TRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147 HSP 2 Score: 122.094 bits (305), Expect = 1.862e-62 Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI KEL+DL +DPPA CSAGPV DD+FHWQATIMGP +SP+ GGVF ++IHFP DYPFKPPKVAF
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.556e-61 Identity = 65/78 (83.33%), Postives = 73/78 (93.59%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498
TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPLVPEIAH+YK D++KYE+TA+ WTQKYAMG
Sbjct: 72 TKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149 HSP 2 Score: 114.775 bits (286), Expect = 1.556e-61 Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
MASKRI++EL+D+Q+ PPA+CSAGPVA+ D+FHWQATIMGP DSP++GGVF VSI F DYPFKPPKV F+
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFK 71 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |