DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2Z_HUMAN (Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 7.822e-15 Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 R + RI +++ + K+PP P DM A I GP D+P+ GG FL PPDYP PP+V Sbjct: 95 RTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRV 165 HSP 2 Score: 43.5134 bits (101), Expect = 7.822e-15 Identity = 30/79 (37.97%), Postives = 41/79 (51.90%), Query Frame = 1 Query: 274 FHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 F+PN NG +CL IL WSPA +IS VL+SI SL+T+ P ++P + H D Y R T + A+ Sbjct: 177 FNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERH--PGDSKNYNECIRHETIRVAV 253
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.041e-14 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 HSP 2 Score: 31.9574 bits (71), Expect = 1.041e-14 Identity = 21/72 (29.17%), Postives = 34/72 (47.22%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 + + A RI K++ +L P +C DD+ +++ I P + + GG F+ S YP PPKV Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKV 93
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.346e-14 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 277 HPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-TDRAKYETTARSWTQKYAM 495 HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K D Y + + +Y++ Sbjct: 122 HPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196 HSP 2 Score: 42.743 bits (99), Expect = 1.346e-14 Identity = 24/80 (30.00%), Postives = 40/80 (50.00%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAG-----------PVADDMFH-WQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 A KR+ +E + + K+ SA PV++D F+ W A + GP+D+ + + + I P +YP +PPK F Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTF 82
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.352e-14 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 HSP 2 Score: 31.5722 bits (70), Expect = 1.352e-14 Identity = 21/72 (29.17%), Postives = 34/72 (47.22%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 + + A RI K++ +L P +C DD+ +++ I P + + GG F+ S YP PPKV Sbjct: 25 KKASAAQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKV 93
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.282e-14 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 268 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 471 K+FHPNI+ +G ICL+IL+E WSPAL + ++L + SL +PN +DPL E A + D+ ++ R Sbjct: 103 KIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170 HSP 2 Score: 29.6462 bits (65), Expect = 2.282e-14 Identity = 22/93 (23.66%), Postives = 39/93 (41.94%), Query Frame = 3 Query: 9 QTQTLRPQSLLRNSQMASK-----------RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 Q Q + Q L +N+ + K R+ K++++L+ P + + + I+ P + + GG F + F YP PPKV Sbjct: 6 QLQQQKQQQLAKNAGSSVKANTNSTSPAKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKV 98
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-14 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 HSP 2 Score: 30.8018 bits (68), Expect = 2.284e-14 Identity = 20/72 (27.78%), Postives = 33/72 (45.83%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 + + A RI K++ +L P +C DD+ +++ I P + + G F+ S YP PPKV Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKV 93
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-14 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 HSP 2 Score: 30.8018 bits (68), Expect = 2.284e-14 Identity = 20/72 (27.78%), Postives = 33/72 (45.83%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 + + A RI K++ +L P +C DD+ +++ I P + + G F+ S YP PPKV Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKV 93
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-14 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 HSP 2 Score: 30.8018 bits (68), Expect = 2.284e-14 Identity = 20/72 (27.78%), Postives = 33/72 (45.83%), Query Frame = 3 Query: 42 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 254 + + A RI K++ +L P +C DD+ +++ I P + + G F+ S YP PPKV Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKV 93
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 2.308e-14 Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPAS----CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 ASKR+ KEL+DLQK+ P CS D++ W A ++ P P+ F + I FP +YPF+PP V F Sbjct: 3 ASKRVAKELEDLQKELPKYLRNLCSE---EDNVLVWHALLL-PERPPYNLKAFRLCISFPREYPFQPPTVKF 70 HSP 2 Score: 49.2914 bits (116), Expect = 2.308e-14 Identity = 21/78 (26.92%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 T+++HPN++ +G +CL I+ K+ W + +VL ++ L+ P P P+ E+A D ++ A+ +T ++ + Sbjct: 72 TRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQFGV 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.856e-14 Identity = 27/77 (35.06%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 268 KVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 K++HPN++ +GS+CLD++ + WSP + + + + LL PNP DPL E A + D+ YE + + ++YA Sbjct: 71 KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147 HSP 2 Score: 37.3502 bits (85), Expect = 3.856e-14 Identity = 21/69 (30.43%), Postives = 32/69 (46.38%), Query Frame = 3 Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 M+S +E+ DL K + + D M + GP DS + GGV+ V + YP+K P + F Sbjct: 1 MSSPSKRREM-DLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGF 68 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |