DC900339
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.757e-60 Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKYAM
Sbjct: 71 TRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147 HSP 2 Score: 115.546 bits (288), Expect = 3.757e-60 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV +DMFHWQATIMGP+DSP+ GG F ++I FP +YPFKPPKV F
Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.757e-60 Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495
T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKYAM
Sbjct: 71 TRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147 HSP 2 Score: 115.546 bits (288), Expect = 3.757e-60 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 3
Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260
MA KRI+KEL DL +DPPA CSAGPV +DMFHWQATIMGP+DSP+ GG F ++I FP +YPFKPPKV F
Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.165e-46 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 117 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192 HSP 2 Score: 95.5153 bits (236), Expect = 4.165e-46 Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 3
Query: 33 SLLRNSQMAS---KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
S+ +NS++ S KRI KEL D+ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F P+YPFKPPKV FR
Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFR 116
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.165e-46 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 117 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192 HSP 2 Score: 95.5153 bits (236), Expect = 4.165e-46 Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 3
Query: 33 SLLRNSQMAS---KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
S+ +NS++ S KRI KEL D+ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F P+YPFKPPKV FR
Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFR 116
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.039e-45 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 125 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200 HSP 2 Score: 93.2041 bits (230), Expect = 2.039e-45 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F PDYPFKPPKV FR
Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFR 124
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.039e-45 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 125 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200 HSP 2 Score: 93.2041 bits (230), Expect = 2.039e-45 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F PDYPFKPPKV FR
Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFR 124
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.210e-44 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 131 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206 HSP 2 Score: 90.1225 bits (222), Expect = 2.210e-44 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FR
Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFR 130
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.210e-44 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 131 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206 HSP 2 Score: 90.1225 bits (222), Expect = 2.210e-44 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FR
Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFR 130
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.210e-44 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA
Sbjct: 131 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206 HSP 2 Score: 90.1225 bits (222), Expect = 2.210e-44 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F DYPFKPPKV FR
Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFR 130
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.875e-44 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492
T+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +R +++ AR WT++YA
Sbjct: 156 TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231 HSP 2 Score: 94.7449 bits (234), Expect = 2.875e-44 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 3
Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263
++KRI KEL ++ DPP +CSAGP D+++ W +TI+GP S + GGVF + IHF P+YPFKPPKV FR
Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFR 155 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |