DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.379e-34 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 265 TKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 TK++HPNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+PL EIA +KTDR + TA+ WT+KYA Sbjct: 72 TKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYA 147 HSP 2 Score: 78.1814 bits (191), Expect = 6.379e-34 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 A KR+ KE+ D+ K PP+ CSA V D++ W+AT+ GP SPF GVF + I P DYPFKPP + F Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 178 TAHLLGVYFL-------YPFISHLIIHSSHRRWPSVTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +A+ GV+FL YPF I + TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 43 SAYQGGVFFLTVHFPTDYPFKPPKIAFT--------TKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147 HSP 2 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 MA KRI KEL DLQ+DPPA CSAGPV DD+FHWQATIMGP DS + GGVF +++HFP DYPFKPPK+AF Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 178 TAHLLGVYFL-------YPFISHLIIHSSHRRWPSVTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +A+ GV+FL YPF I + TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 43 SAYQGGVFFLTVHFPTDYPFKPPKIAFT--------TKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147 HSP 2 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 MA KRI KEL DLQ+DPPA CSAGPV DD+FHWQATIMGP DS + GGVF +++HFP DYPFKPPK+AF Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 178 TAHLLGVYFL-------YPFISHLIIHSSHRRWPSVTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +A+ GV+FL YPF I + TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 43 SAYQGGVFFLTVHFPTDYPFKPPKIAFT--------TKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147 HSP 2 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 54 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 MA KRI KEL DLQ+DPPA CSAGPV DD+FHWQATIMGP DS + GGVF +++HFP DYPFKPPK+AF Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAF 69
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 9.645e-32 Identity = 42/76 (55.26%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLVPEI ++K +R +++ AR +T ++A Sbjct: 77 TPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152 HSP 2 Score: 60.077 bits (144), Expect = 9.645e-32 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 3 Query: 117 SAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 S G +++++ W A I GP +P+ GG+F +SI FP DYPFKPPK F+ Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFK 76
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.709e-31 Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +TK++HPNI+ G ICLD+LK++WSPAL I +LLSI +LL+ PNPDDPL ++A ++K + A+ AR WTQKYA+ Sbjct: 72 ITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAV 149 HSP 2 Score: 56.9954 bits (136), Expect = 4.709e-31 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +RI KE + L ++P +A P ++ ++ + GP+DSPF GGVF + + P DYP PKV F Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRF 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.979e-31 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +K++ A+ TA+ WT+ YA G Sbjct: 74 LTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152 HSP 2 Score: 59.6918 bits (143), Expect = 7.979e-31 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +RI KE + L +P SA P D+M ++ I+GP+ SP+ GGVF + + P +YP PKV F Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRF 73
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.295e-30 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +K++ A+ TA+ WT+ YA G Sbjct: 74 LTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 152 HSP 2 Score: 58.151 bits (139), Expect = 2.295e-30 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +RI KE + L +P SA P ++M ++ I+GP+ SP+ GGVF + + P +YP PKV F Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRF 73
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.295e-30 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ + AR WT+ YA Sbjct: 72 LTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148 HSP 2 Score: 60.077 bits (144), Expect = 2.295e-30 Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 KRI KE + L +P SA P D+ +++ I GP DSPF GGVF + + DYP PKV F Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRF 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.295e-30 Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y+ DR ++ AR + +++A Sbjct: 77 TRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153 HSP 2 Score: 74.7146 bits (182), Expect = 2.295e-30 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S +S+R+ KE DL++ P V D++FHW T +GPSDS +AGG F S+ FP DYPF+PP + F Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEF 75 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |