DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.898e-29 Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K++ A+ TAR+WT+ YAM Sbjct: 72 MTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149 HSP 2 Score: 52.373 bits (124), Expect = 1.898e-29 Identity = 25/66 (37.88%), Postives = 34/66 (51.52%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +RI KE + L +P A P + ++ I GP DSPF GG F + + P +YP PKV F Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRF 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.472e-29 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q DPPA SA PVAD++ W A I+GP+D+PF G F + +HF YP KPP V F Sbjct: 2 STSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKF 72 HSP 2 Score: 73.1738 bits (178), Expect = 2.472e-29 Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++YK +R +Y ET +SW Sbjct: 73 ISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.180e-29 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 265 TKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*EGL 510 TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR WT YA G+ Sbjct: 74 TKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYAAAPAGV 156 HSP 2 Score: 68.1662 bits (165), Expect = 3.180e-29 Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S S+RI KEL D+Q+D A + DD+ H + GP +P+ GG F+V I P DYPF+PPK+ F Sbjct: 2 SDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.219e-29 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ +NG +CLDIL+ +WSP ++ VL SI SLL DPN P E +++YK +R +Y ET RSW Sbjct: 73 ISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVERSW 149 HSP 2 Score: 72.7886 bits (177), Expect = 3.219e-29 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q DPPA SA P+ D++ W A I+GP+D+PF G F + + F YP KPP+V F Sbjct: 2 STAARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.191e-29 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q DPPA SA PVAD++ W A I+GP+D+PF G F + +HF YP KPP V F Sbjct: 2 STSARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKF 72 HSP 2 Score: 72.4034 bits (176), Expect = 4.191e-29 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWTQ 483 ++++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++Y+ +R +Y ET +SW + Sbjct: 73 ISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.105e-29 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 486 V+KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P A +YK +R +YE ++ ++ Sbjct: 73 VSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147 HSP 2 Score: 68.1662 bits (165), Expect = 7.105e-29 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP D+PF G F ++I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.658e-28 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ + G +CLDIL+ +WSP ++ VL SI SLL DPN P E +++YK +R +Y ET +SW Sbjct: 73 ISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRETVEKSW 149 HSP 2 Score: 73.1738 bits (178), Expect = 2.658e-28 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q DPPA SA PV D++ W A I+GP+D+PF G F + + F YP KPP+V F Sbjct: 2 STAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.661e-28 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K + + AR WT+KYA+ Sbjct: 71 LTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148 HSP 2 Score: 60.077 bits (144), Expect = 2.661e-28 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 KRI KE++ L +DPP A P D++ +++ T+ GP S + GG F + + P +YP PP V F Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.439e-28 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ ++G +CLDIL+ +WSP +S +L S+ SLL DPN P E A++YK R+ Y ET SW Sbjct: 73 ISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSW 149 HSP 2 Score: 72.7886 bits (177), Expect = 3.439e-28 Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q+DPP+ SA P+ D++ W A I+GPSD+PF G F + + F YP KPP+V F Sbjct: 2 STPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.453e-28 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 265 TKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 TKV+HPNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP E+A Y DR + TA WT+ YA Sbjct: 73 TKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149 HSP 2 Score: 62.3882 bits (150), Expect = 4.453e-28 Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +KRI KE++ ++ DP A + V++ D+ H + T +GP +P+ GG F+V I P +YPFKPPK+ F Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQF 71 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |