DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 4.506e-28 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q DPPA SA PV D++ W A I+GP+D+PF G F + +HF YP KPP V F Sbjct: 2 STAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKF 72 HSP 2 Score: 70.0922 bits (170), Expect = 4.506e-28 Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ + G +CLDIL+ +WSP ++ VL SI SLL DPN E +++YK +R +Y ET +SW Sbjct: 73 ISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSW 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.506e-28 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE-----TTARSWT 480 V+++FHPN+ S+G +CLDIL+ +WSP ++ +L S+ SLL DPN P E + +YK R +YE T SWT Sbjct: 73 VSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150 HSP 2 Score: 72.0182 bits (175), Expect = 4.506e-28 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q+DPP SA PVAD++ W A I+GP+++PF G F + + F YP KPP V F Sbjct: 2 STTARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.854e-28 Identity = 31/66 (46.97%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A +Y+ +R +YE Sbjct: 73 ISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYE 138 HSP 2 Score: 70.8626 bits (172), Expect = 9.854e-28 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +R+ ++ K LQ+DPPA S P D++ W+A I GP ++PF G F +S+ F +YP KPP V F Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.897e-28 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWTQ 483 ++++FHPN+ ++G +CLDIL+ +WSP +S +L SI SLL DPN P E A++YK R++Y ET SW + Sbjct: 73 ISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNE 151 HSP 2 Score: 68.9366 bits (167), Expect = 9.897e-28 Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q+D P+ SA P+ D++ W A I+GP+D+PF G F + + F YP KPP V F Sbjct: 2 STPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.935e-28 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + + + AR WT+ YA Sbjct: 72 LTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148 HSP 2 Score: 60.8474 bits (146), Expect = 9.935e-28 Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 KRI KE + L DP +A P D++ ++Q TI GP SP+ G+F + ++ P DYP + PKV F Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRF 71
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.194e-27 Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 V+K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 VSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 67.0106 bits (162), Expect = 2.194e-27 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPPA S P +++ W A I GP +PF G F ++I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.194e-27 Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 V+K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 VSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 67.0106 bits (162), Expect = 2.194e-27 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPPA S P +++ W A I GP +PF G F ++I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.068e-26 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +Q+DPPA SA PV+D++ W A I+GP+D+PF G F + + F YP KPP V F Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKF 72 HSP 2 Score: 68.1662 bits (165), Expect = 1.068e-26 Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 V+ +FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P E A +++ ++ +Y +T SW Sbjct: 73 VSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSW 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.391e-26 Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 LSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 65.4698 bits (158), Expect = 1.391e-26 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.391e-26 Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 LSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 65.4698 bits (158), Expect = 1.391e-26 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |