DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.268e-25 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A +++ +++Y ET +SW Sbjct: 73 LSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSW 149 HSP 2 Score: 64.3142 bits (155), Expect = 4.268e-25 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.734e-24 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE-----TTARSW 477 ++K+FHPNI +NG +CLDIL+ +WSP ++ +L S+ SLL DPNP P + A ++K + +YE T SW Sbjct: 73 ISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVELSW 149 HSP 2 Score: 58.151 bits (139), Expect = 7.734e-24 Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K L D P S P D++ W A I GP ++PF G F +++ F YP KPP V F Sbjct: 2 STAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.303e-23 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +T ++HPNI+S G ICLD+LK W P+L I+ +L I L+ +PNPDDPL+ +I+ +K ++ + AR WT+K+A Sbjct: 71 LTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151 HSP 2 Score: 53.5286 bits (127), Expect = 1.303e-23 Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + R+ +EL L +PP + D M +A I+G +++P+ GVF + +H P YPF+PP++ F Sbjct: 4 TSRLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.316e-23 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +TK++HPN++ I LDILK++WSPAL I VLLSI +LL PNPDDPL ++ +KT+ A+ TAR+WT+ YAM Sbjct: 73 MTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150 HSP 2 Score: 40.0466 bits (92), Expect = 1.316e-23 Identity = 24/66 (36.36%), Postives = 31/66 (46.97%), Query Frame = 3 Query: 66 RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPS-DSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 RI KE + L +P A P + ++ I G S DSPF GG F + +YP PKV F Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.206e-23 Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +T ++HPNI+S G ICLD+LK W P+L I+ VL SI L+++PNPDDPL+ +I+ +K ++ + AR WT+K+A Sbjct: 71 LTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151 HSP 2 Score: 49.6766 bits (117), Expect = 2.206e-23 Identity = 22/67 (32.84%), Postives = 38/67 (56.72%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + R+ +EL L +PP + D M +A I+G +++P+ GVF + + P YPF+PP++ F Sbjct: 4 ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.773e-23 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT--------DRAKYETTAR 471 T+ FHPN+++NG+ICLDILK++WSP + +L+SI SLL +PN + PL A ++ D+ E T+R Sbjct: 76 TQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQEATSR 152 HSP 2 Score: 62.7734 bits (151), Expect = 3.773e-23 Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281 SKR+ EL +L P SA P D++F+W TI G D+ + F +S+ FP DYP+KPP V F F P Sbjct: 8 SKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHP 81
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 4.859e-23 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 262 VTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 76 ITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 HSP 2 Score: 48.521 bits (114), Expect = 4.859e-23 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPAS---CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + +A +RI +E K++ K S V ++ + I GP D+P+ GG + + I P YPF PPKV F Sbjct: 2 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRF 75
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 4.859e-23 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 262 VTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 76 ITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 HSP 2 Score: 48.521 bits (114), Expect = 4.859e-23 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPAS---CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + +A +RI +E K++ K S V ++ + I GP D+P+ GG + + I P YPF PPKV F Sbjct: 2 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRF 75
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 4.859e-23 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 262 VTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 76 ITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 HSP 2 Score: 48.521 bits (114), Expect = 4.859e-23 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPAS---CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + +A +RI +E K++ K S V ++ + I GP D+P+ GG + + I P YPF PPKV F Sbjct: 2 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRF 75
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.069e-22 Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +T ++HPNI+S+G ICLDILK W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K ++ + A+ WT+ +A Sbjct: 71 LTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151 HSP 2 Score: 50.0618 bits (118), Expect = 1.069e-22 Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 3 Query: 60 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + R+ KEL L +PP + D + +A I+G +++P+ GVF + + P YPF+PP+V F Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRF 70 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |