CX043717

Overview
NameCX043717
Unique NameCX043717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9479 contig Csv1_Contig9479:952..1808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BAREL (Citrate synthase (Fragment) OS=Bartonella elizabethae GN=gltA PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.049e-47
Identity = 90/160 (56.25%), Postives = 118/160 (73.75%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTE 472
            +D +FILHA+HE N STS  R   SSG + +  +A  V  L+GP HGGANEA LKML EIG+++ IPEFI   K++    ++ GFGHRVYKNYDPRAK+++K   EV     +  DPL+++A+ LEK ALSDEYF+++KLYPNVDFYSG+  +A+GFPTE
Sbjct:  162 MDQIFILHADHEQNASTSTVRLAGSSGANPFACIAAGVACLWGPAHGGANEACLKMLQEIGSIKRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLKELNIQDDPLLDIAIELEKIALSDEYFIEKKLYPNVDFYSGITLKALGFPTE 321          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BARVI (Citrate synthase (Fragment) OS=Bartonella vinsonii GN=gltA PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.496e-47
Identity = 91/160 (56.88%), Postives = 118/160 (73.75%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTE 472
            +D +FILHA+HE N STS  R   SSG + +  +A  V  L+GP HGGANEA LKML EIG+V+ IPEFI   K++    ++ GFGHRVYKNYDPRAK+++K   EV     +  DPL+++A+ LEK AL+DEYFV++KLYPNVDFYSG+  +A+GFPTE
Sbjct:  160 MDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGVACLWGPAHGGANEACLKMLQEIGSVKRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLKELNIQDDPLLDIAIELEKIALNDEYFVEKKLYPNVDFYSGITLKALGFPTE 319          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_HELPY (Citrate synthase OS=Helicobacter pylori GN=gltA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.788e-47
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = 2
Query:    8 DVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTG 586
            D +  LHA+H  N S++  R++AS+GV  Y A++  + AL+G LHGGANE VL  L EIG V+N+ ++I  VK++    K+ GFGHRVYK+YDPRAK+++ L +E+    +   + L E+A  +E+ AL DEYF++R LYPNVDFYSG I RA+  P  FF  +F I R  G+ A   E +  P  +I RP+QVY G
Sbjct:  229 DKILTLHADHSQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKDKNDNFKLMGFGHRVYKSYDPRAKILKGLKDELHQKGVKMDERLSEIAAKVEEIALKDEYFIERNLYPNVDFYSGTILRALKIPVRFFTPVFVIGRTVGWCAQLLEHVKSPQARITRPRQVYVG 425          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_HELPJ (Citrate synthase OS=Helicobacter pylori J99 GN=gltA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.328e-46
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = 2
Query:    8 DVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTG 586
            D +  LHA+H  N S++  R++AS+GV  Y A++  + AL+G LHGGANE VL  L EIG V+N+ ++I  VK++    K+ GFGHRVYK+YDPRAK+++ L +E+    +   + L E+A  +E+ AL DEYF++R LYPNVDFYSG I RA+  P  FF  +F I R  G+ A   E +  P  +I RP+QVY G
Sbjct:  229 DKILTLHADHGQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKDKNDNFKLMGFGHRVYKSYDPRAKILKGLKDELHQKGVKMDERLSEIAAKVEEIALKDEYFIERNLYPNVDFYSGTILRALKIPVRFFTPVFVIGRTVGWCAQLLEHVKSPQARITRPRQVYVG 425          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BARTA (Citrate synthase (Fragment) OS=Bartonella taylorii GN=gltA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.735e-46
Identity = 91/160 (56.88%), Postives = 116/160 (72.50%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTE 472
            +D +F LHA+HE N STS  R   SSG + +  +A  V  L+GP HGGANEA LKML EIG+VE IPEFI   K++     + GFGHRVYKNYDPRAK+++K   EV     +  DPL+++A+ LEK AL+DEYFV++KLYPNVDFYSG+  +A+GFPTE
Sbjct:  163 MDRIFTLHADHEQNASTSTVRLAGSSGANPFACIAAGVACLWGPAHGGANEACLKMLQEIGSVERIPEFIARAKDKNDPFHLMGFGHRVYKNYDPRAKIMQKTCHEVLKELNIQDDPLLDIAMELEKIALNDEYFVEKKLYPNVDFYSGITLKALGFPTE 322          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BARDO (Citrate synthase (Fragment) OS=Bartonella doshiae GN=gltA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.048e-46
Identity = 88/158 (55.70%), Postives = 116/158 (73.42%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGR--DPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFP 466
            +D +FILHA+HE N STS  R   SSG + +  +A  V  L+GP HGGANEA LKML EIG+V+ IPEFI   K++    ++ GFGHRVYKNYDPRAK+++K   EV   + R  DPL+++A+ LE  AL+DEYF+++KLYPNVDFYSG+  +A+GFP
Sbjct:  163 MDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGVACLWGPAHGGANEACLKMLKEIGSVKKIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLKELNRQDDPLLDIAIELEHIALNDEYFIEKKLYPNVDFYSGITLKALGFP 320          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BARBA (Citrate synthase (Fragment) OS=Bartonella bacilliformis GN=gltA PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.593e-46
Identity = 89/160 (55.62%), Postives = 115/160 (71.88%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTE 472
            +D +F LHA+HE N STS  R   SSG + Y  +A  V  L+GP HGGANEA LKML EIG+V+ IPEFI   K++    ++ GFGHRVYKNYDPRAK+++K   EV     +  DPL+++A+ LE  AL+DEYF+ +KLYPNVDFYSG+  +A+GFPTE
Sbjct:  162 MDRIFTLHADHEQNASTSTVRLAGSSGANPYACIAAGVACLWGPAHGGANEACLKMLQEIGSVKKIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLQELNIQDDPLLDIAMELEHIALNDEYFINKKLYPNVDFYSGITLKALGFPTE 321          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY2_BACSU (Citrate synthase 2 OS=Bacillus subtilis GN=citZ PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.345e-43
Identity = 86/201 (42.79%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   20 ILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            ILHA+HE+N ST  AR   ++  D+Y+ +  A+GAL GPLHGGANE V+KML EIG VEN   +I     +K K+ GFGHRVYK+ DPRAK ++++++ + ++ G     E+++ +E    S+     +KL PNVDFYS  +Y ++G   + F  +FA+ RM+G+LAH  E  D  + +++RP+  YTG   + ++P++ER
Sbjct:  178 ILHADHELNASTFTARVCVATLSDIYSGITAAIGALKGPLHGGANEGVMKMLTEIGEVENAEPYIRAKLEKKEKIMGFGHRVYKHGDPRAKHLKEMSKRLTNLTGESKWYEMSIRIEDIVTSE-----KKLPPNVDFYSASVYHSLGIDHDLFTPIFAVSRMSGWLAHILEQYD--NNRLIRPRADYTGPDKQKFVPIEER 371          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_DEIRA (Citrate synthase OS=Deinococcus radiodurans GN=gltA PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.985e-42
Identity = 87/207 (42.03%), Postives = 131/207 (63.29%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            + D+  +LHA+H MN ST  A   +S+  D+Y+ +  A+GAL GPLHGGANEAV+ ML+EIGTV+    +I G  + K K+ G GHRVYK +DPR++V+R  AE V +  G+    ++  A+EK  +  +    + +YPNVDFYSG +Y  +G   E+F  +FA+ R++G+ A   E     D +++RP   YTG   +HY+ +K+R
Sbjct:  174 LFDIALVLHADHGMNASTFTAIATSSTLSDMYSCMVSAIGALKGPLHGGANEAVMTMLDEIGTVDKAEAYITGKLDNKEKIMGVGHRVYKYFDPRSRVLRDYAEHVANKEGKSNYYQILEAIEKIIV--DRMGAKGIYPNVDFYSGTVYSDLGIKKEYFTPIFALARISGWCASVIEY--SQDNRLLRPDAEYTGARDQHYVDIKDR 376          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_THIFE (Citrate synthase OS=Thiobacillus ferrooxidans GN=gltA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.543e-42
Identity = 88/209 (42.11%), Postives = 130/209 (62.20%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFS--IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            +LD   ILHAEH +N ST +     S+  + Y  + GA+G L GPLHGGAN+ V++ML EI +V+ +  +++     K K+ GFGHR+YK  DPRA +++ + E++ S   +    L E+A+ +E+ A   E    + ++ NVDFYSG++Y  MG   + F  +FA+ R AG+LAHWRE L   D +I RP QVYTG   R Y+P+ +R
Sbjct:  181 ILDSCLILHAEHTINASTFSVLVTGSTLTNPYHVIGGAIGTLAGPLHGGANQKVVEMLEEISSVQQVGAYLDRKMANKEKIWGFGHRIYKTRDPRAVILKGMMEDMASHGNLRHSSLFEIAIEVERQA--TERLGAQGIHANVDFYSGVLYHEMGIKADLFTPIFAMARSAGWLAHWREQL--ADNRIFRPTQVYTGEQDRRYVPVAQR 385          
The following BLAST results are available for this feature:
BLAST of CX043717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CISY_BAREL2.049e-4756.25Citrate synthase (Fragment) OS=Bartonella elizabet... [more]
CISY_BARVI3.496e-4756.88Citrate synthase (Fragment) OS=Bartonella vinsonii... [more]
CISY_HELPY7.788e-4747.21Citrate synthase OS=Helicobacter pylori GN=gltA PE... [more]
CISY_HELPJ1.328e-4647.21Citrate synthase OS=Helicobacter pylori J99 GN=glt... [more]
CISY_BARTA1.735e-4656.88Citrate synthase (Fragment) OS=Bartonella taylorii... [more]
CISY_BARDO5.048e-4655.70Citrate synthase (Fragment) OS=Bartonella doshiae ... [more]
CISY_BARBA6.593e-4655.63Citrate synthase (Fragment) OS=Bartonella bacillif... [more]
CISY2_BACSU2.345e-4342.79Citrate synthase 2 OS=Bacillus subtilis GN=citZ PE... [more]
CISY_DEIRA1.985e-4242.03Citrate synthase OS=Deinococcus radiodurans GN=glt... [more]
CISY_THIFE7.543e-4242.11Citrate synthase OS=Thiobacillus ferrooxidans GN=g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13A05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13A05-B9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043717 ID=CX043717; Name=CX043717; organism=Citrus sinensis; type=EST; length=857bp
TGTGCTGGATGTTCTCTTCATACTACATGCTGAACACGAAATGAATTGCT
CCACATCTGCTGCCCGTCATCTTGCATCAAGTGGTGTTGATGTATATACC
GCACTTGCTGGCGCTGTTGGAGCACTCTATGGTCCTCTTCATGGTGGAGC
CAATGAGGCTGTGCTTAAGATGCTGAATGAGATAGGTACAGTTGAGAATA
TACCCGAGTTCATTGAAGGTGTGAAGAATAGAAAGAGGAAGATGTCAGGT
TTTGGGCACCGCGTATACAAAAACTATGATCCCAGAGCAAAGGTCATTAG
GAAACTAGCAGAGGAAGTATTTTCCATTGTTGGCCGGGATCCTCTTATTG
AGGTTGCTGTTGCTTTGGAGAAGGCTGCACTATCTGATGAGTATTTTGTT
AAGAGGAAGCTATATCCAAATGTTGACTTCTACTCTGGGTTGATATATAG
GGCAATGGGATTTCCAACGGAGTTTTTCCCTGTTCTATTTGCCATCCCAC
GCATGGCTGGGTACTTAGCACACTGGCGAGAGTCCTTGGATGATCCTGAC
ACAAAGATAATGAGACCCCAACAGGTTTATACTGGTGTATGGATGCGACA
TTATATGCCACTCAAAGAGCGGATGATAGAGAAGAATGCAGACAGGCTTG
GACAGGTGTCTGTTTCAAATGCCACAAGACGAAGACTCGCTGGATCAGGG
AATTAAATGTTTTTGGCTTCATGAATAAATATTCAGAGAAGAAAAATAAA
TGACATGAATATTATAAAGAAAAATAATAATTACAGGCCTCTGGTTTTCT
GTTTGAATATCTTCTACAGAAGTAGCAGGTTCATATGTTTTTTGGTTCCT
TGTACTG
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