DC900335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E_CANAL (Eukaryotic translation initiation factor 4E OS=Candida albicans GN=TIF45 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.424e-22 Identity = 48/124 (38.71%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAA--WXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKAN----LDTMWLETMMALIGEQF-DEVDEICGELL 433 H L +WT W+ +KP+ + W ++ V TF +VEEFW +Y I ++LP+ +D+HLFK GI P+WED + GGKW + N+K+ ++ +WL ++A+IGE DE +E+ G +L Sbjct: 30 HPLNSRWTLWY---TKPQTNKSENWHDLLKPVITFSSVEEFWGIYNSIPPANQLPLKSDYHLFKEGIRPEWEDEANSKGGKWQFSFNKKSEVNPIINDLWLRGLLAVIGETIEDEENEVNGIVL 150 HSP 2 Score: 26.5646 bits (57), Expect = 2.424e-22 Identity = 10/39 (25.64%), Postives = 26/39 (66.67%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILDV 540 G+V ++R++ ++ +WTK +E+ +G++ K++L + Sbjct: 147 GIVLNIRKQAYRVGIWTKD-CDESKLKTVGERLKKVLQL 184
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E_ASHGO (Eukaryotic translation initiation factor 4E OS=Ashbya gossypii GN=TIF45 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQG--AAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSN-RKANLDTMWLETMMALIGEQFDEVD-EICGELLLVYARG 451 H L KWT W+ +KP G +W +R V +F TVEEFW + I KP LP+ +D+HLF+ I P+WED + GGKWS R +D +WL ++A+IGE DE + EI G ++ V G Sbjct: 35 HPLNSKWTLWY---TKPPVGDNESWSDLLRPVTSFTTVEEFWAIQNAIPKPRELPLKSDYHLFRNDIRPEWEDEANSRGGKWSFQFKVRNPPIDDLWLRALLAVIGESIDEDEFEINGVVINVRRSG 158
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: I4E1B_MOUSE (Eukaryotic translation initiation factor 4E type 1B OS=Mus musculus GN=Eif4e1b PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21 Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 2 Query: 65 PPQ--SQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSN---RKANLDTMWLETMMALIGEQFDEVD-EICGELLLVYARGRTNLPYGPRQQQMKLLRWALERSGRRSLMSL 544 PP+ S+LH L+ +W WF K + AW +++ V F+TVE+FW +Y I S+L D+ LFK GI P WED GG+W ++ + R LD +WLET++ L+G F+E E+CG ++ + R ++ K+ W E + +M + Sbjct: 57 PPEVLSKLHPLQYRWVLWF---FKNDRSRAWQDNLQLVTKFNTVEDFWAVYSHIKLASKLSSGCDYALFKEGILPMWEDNRNKQGGRWLLSIDKQLRHFELDRLWLETLLCLVGNCFEEYSREVCGAVVNI------------RTKRDKIALWTSEAEDKAGVMQI 207
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.689e-21 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLV 439 H L K++ W+ + + ++ +++K+ F TVE FW Y + + S LP D H FK GI P WED NGGKW + ++ + W + ++AL+G+Q D+ D ICG +L V Sbjct: 43 HPLRYKFSIWYTRRTPGVRNQSYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSA-RFWEDLLLALVGDQLDDADNICGAVLSV 160 HSP 2 Score: 28.4906 bits (62), Expect = 5.689e-21 Identity = 11/32 (34.38%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 415 DLWGVVASVRQRQDKLALWTKTAANEAAQMGI 510 ++ G V SVR +D +++W + A++ A MG+ Sbjct: 152 NICGAVLSVRFNEDIISVWNRNASDHQAVMGL 183
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20 Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 2 Query: 62 VPPQSQLHKLERKWTFWFDNIS--KPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLV 439 V P H L+ +TFW+ + +P ++ +++++ TF +VE+FW Y + +P L ++DFHLFK GI+P WED NGGKW + RK W ++A++GEQF +EICG ++ V Sbjct: 47 VVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKW-IIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSV 173
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20 Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 2 Query: 62 VPPQSQLHKLERKWTFWFDNIS--KPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLV 439 V P H L+ +TFW+ + +P ++ +++++ TF +VE+FW Y + +P L ++DFHLFK GI+P WED NGGKW + RK W ++A++GEQF +EICG ++ V Sbjct: 47 VVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKW-IIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSV 173
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E3_DANRE (Eukaryotic translation initiation factor 4E type 3 OS=Danio rerio GN=eif4e3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.552e-17 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 89 LERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEV----DEICGELLLVYAR 448 L WTFW D A S+++K+YT TV+ FW +Y I S LP+ +HL + P WE+ A GG W + +++ L +W E ++A IGEQF + DE+ G + V R Sbjct: 49 LHSPWTFWLDRSLPGTTAAECESNLKKIYTVHTVQSFWSVYNNIPPVSCLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKESTL-AVWKELLLATIGEQFTDYCASEDEVVGVSVSVRER 171 HSP 2 Score: 26.9498 bits (58), Expect = 2.552e-17 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTA--ANEAAQMG 507 GV SVR+R+D + +W A ANEA +G Sbjct: 163 GVSVSVREREDVVQVWNGNASFANEANVLG 192
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.304e-17 Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 65 PPQSQLHKLERKWTF-WFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDT-MWLETMMALIGEQFDEVDEICG 424 P S H+L+ +TF +F + + S ++ V +VE+FW + +P+ + AD H FKTG++P WEDP GGKW + K L T +W +MA+IGEQF DE+CG Sbjct: 25 PVGSDDHQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWII--RLKKGLSTRIWENLLMAIIGEQFLVGDELCG 144 HSP 2 Score: 27.7202 bits (60), Expect = 7.304e-17 Identity = 12/44 (27.27%), Postives = 24/44 (54.55%), Query Frame = 1 Query: 409 G*DLWGVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILDV 540 G +L G V S+R ++D ++LW + A + I + + +L + Sbjct: 139 GDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQL 182
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E3_MOUSE (Eukaryotic translation initiation factor 4E type 3 OS=Mus musculus GN=Eif4e3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.606e-16 Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 62 VPPQSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEV----DEICG 424 +PP+ L WTFW D A S+++K+YT TV+ FW +Y I + LP+ +HL + P WE+ A GG W + K + T+W E ++A IGEQF + DEI G Sbjct: 23 LPPEPGGVPLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKM-KVPKDSTSTVWKELLLATIGEQFTDCAAADDEIIG 146 HSP 2 Score: 23.0978 bits (48), Expect = 1.606e-16 Identity = 9/24 (37.50%), Postives = 15/24 (62.50%), Query Frame = 1 Query: 415 DLWGVVASVRQRQDKLALWTKTAA 486 ++ GV SVR R+D + +W A+ Sbjct: 143 EIIGVSVSVRDREDVVQVWNVNAS 166
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E3_XENTR (Eukaryotic translation initiation factor 4E type 3 OS=Xenopus tropicalis GN=eif4e3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.733e-16 Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 2 Query: 68 PQSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDE----VDEICG 424 P ++ L WTFW D A S+++K+YT T++ FW +Y I + + LP+ +HL + +P WE+ A GG W + ++A+ +W E ++A IGEQF + DE+ G Sbjct: 36 PDTEGIPLHSPWTFWLDRSLPGTTAAECESNLKKIYTVHTIQSFWSVYNNIPQVTNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEAS-SLVWKELLLATIGEQFTDRCAPEDEVIG 157 HSP 2 Score: 22.7126 bits (47), Expect = 7.733e-16 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTAA 486 GV SVR R+D + +W A+ Sbjct: 157 GVSVSVRDREDVVQVWNGNAS 177 The following BLAST results are available for this feature:
BLAST of DC900335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900335 ID=DC900335; Name=DC900335; organism=Citrus sinensis; type=EST; length=545bpback to top |