DC900335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: I4E3B_XENLA (Eukaryotic translation initiation factor 4E type 3-B OS=Xenopus laevis GN=eif4e3-B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.733e-16 Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 68 PQSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDE----VDEICG 424 P ++ L WTFW D A S+++K+YT T++ FW +Y I S LP+ +HL + +P WE+ A GG W + ++A+ +W E ++A IGEQF + DE+ G Sbjct: 36 PDTEGIPLNSPWTFWLDRSLPGTTAAECESNLKKIYTVHTIQSFWSVYNNIPLVSNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEAS-SLVWKELLLATIGEQFTDHCSPEDEVIG 157 HSP 2 Score: 22.7126 bits (47), Expect = 7.733e-16 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTAA 486 GV SVR R+D + +W A+ Sbjct: 157 GVSVSVRDREDVVQVWNGNAS 177
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E3_HUMAN (Eukaryotic translation initiation factor 4E type 3 OS=Homo sapiens GN=EIF4E3 PE=2 SV=4) HSP 1 Score: 81.6481 bits (200), Expect = 1.004e-15 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 89 LERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEV----DEICG 424 L WTFW D A S+++K+YT TV+ FW +Y I + LP+ +HL + P WE+ A GG W + K + T+W E ++A IGEQF + DE+ G Sbjct: 49 LHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKM-KVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIG 163 HSP 2 Score: 22.7126 bits (47), Expect = 1.004e-15 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTAA 486 GV SVR R+D + +W A+ Sbjct: 163 GVSVSVRDREDVVQVWNVNAS 183
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: I4E3A_XENLA (Eukaryotic translation initiation factor 4E type 3-A OS=Xenopus laevis GN=eif4e3-A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.207e-15 Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 68 PQSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDE----VDEICG 424 P ++ L WTFW D A S+++K+YT T++ FW +Y I + LP+ +HL + +P WE+ A GG W + ++A+ +W E ++A IGEQF + DE+ G Sbjct: 36 PDTEGIPLHSPWTFWLDRSLPGTTAAECESNLKKIYTVHTIQSFWSVYNNIPLVTNLPVRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEAS-SLVWKELLLATIGEQFTDRCAPEDEVIG 157 HSP 2 Score: 22.7126 bits (47), Expect = 2.207e-15 Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 1 Query: 424 GVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILDVT 543 GV SVR R+D + +W A+ A+ + +K E+L T Sbjct: 157 GVSVSVRDREDIVQVWNGN-ASVVAEATVLEKIYELLPNT 195 The following BLAST results are available for this feature:
BLAST of DC900335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900335 ID=DC900335; Name=DC900335; organism=Citrus sinensis; type=EST; length=545bpback to top |