DC900331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 5.326e-32 Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 277 GIDAGEEANGEDDFSDDGSQAG---EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR----EVTESINLNKETEGSCSNRSE 696 G+ EE + ++D + G + G EKKRRL++EQV+ LE++FE NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY L++ Y+A++AD +AL+ L AEI LK + + S + KE E ++ ++ Sbjct: 17 GVGVEEEMDVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDAD 163
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 6.956e-32 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 343 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR-------EVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTS---------RNLFPTKSTSSVRPTVAAQLFHNSSSS 852 EKKRRL++ QVK LEKNFEL NKLEPERK++LA+ LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+ N+ L EI LK++ E E N TE S + E S + I+ P+ H R+L P K+ +S A + SS+ Sbjct: 61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVS-LPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSA 245
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 9.085e-32 Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 307 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 738 E+++ D+ Q EKKRRL EQV LE++FE NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+D+D LK ++A++AD +AL N +LH+++M+L TE + KET +E S+ +D+ PA Sbjct: 66 EEEYYDE--QLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL-----TEKLQ-EKET------TTEGSAGAAVDVPGLPA 195
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 9.085e-32 Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 307 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 738 E+++ D+ Q EKKRRL EQV LE++FE NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+D+D LK ++A++AD +AL N +LH+++M+L TE + KET +E S+ +D+ PA Sbjct: 68 EEEYYDE--QLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL-----TEKLQ-EKET------TTEGSAGAAVDVPGLPA 197
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.024e-31 Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 292 EEANGEDDFSDDGSQAG--EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKE--TEG 675 E+A +++S + G EKKRRL ++QVK LEKNFEL NKLEPERK +LA+ LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+ N L EI +K++ E N N + TEG Sbjct: 39 EDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEG 170
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.643e-31 Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 307 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKET 669 +DDF DD Q EKKRRL EQV LEK+FE NKLEPERK QLA+ LGLQPRQVA+WFQNRRARWKTKQLE+DYDLLK Y+ + ++ +++ N KL +E+ +L TE + +ET Sbjct: 57 DDDFYDD--QLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL-----TEKLQGKQET 170
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.004e-30 Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 271 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 633 + G+ E + E++ G GEKKRRL++EQV+ LE++FE+ NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY L+ Y++++ D +AL+ L AEI LK++ Sbjct: 27 YGGVGMEAEGDVEEEMMACGG-GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAK 146
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.004e-30 Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 271 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 633 + G+ E + E++ G GEKKRRL++EQV+ LE++FE+ NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY L+ Y++++ D +AL+ L AEI LK++ Sbjct: 27 YGGVGMEAEGDVEEEMMACGG-GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAK 146
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.817e-30 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 307 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 738 E+++ D+ QA EKKRRL EQV+ LE++FE NKLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D LK Y+A+ AD AL + N +L A++++L TE + +KET S + + + ++ T A Sbjct: 75 EEEYYDE--QAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL-----TEKLQ-DKETSPSSATITTAAQEVDQPDEHTEA 210
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.817e-30 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 307 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPA 738 E+++ D+ QA EKKRRL EQV+ LE++FE NKLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D LK Y+A+ AD AL + N +L A++++L TE + +KET S + + + ++ T A Sbjct: 75 EEEYYDE--QAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL-----TEKLQ-DKETSPSSATITTAAQEVDQPDEHTEA 210 The following BLAST results are available for this feature:
BLAST of DC900331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900331 ID=DC900331; Name=DC900331; organism=Citrus sinensis; type=EST; length=1220bpback to top |