DC900331

Overview
NameDC900331
Unique NameDC900331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1220
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:1..1220. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.929e-22
Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 1
Query:  295 EANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMAL 624
            +  G+      G  A ++K+R + EQ+K+LE  F    KLEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE++Y  L+  Y+A+    E+L+ +   L  ++  L
Sbjct:   13 DVGGKGGKGGGGGGAADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKL 122          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.454e-21
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 1
Query:  211 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAG-EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMAL 624
            SC P   H  ++F G  SM    I+       E+D  +        KKR+L   Q++ LE++FE   +LEP+RK+ LA  LGLQP QVA+WFQNRRAR+KTKQLE D D LK  Y  +K D + L  QNQ L +++  L
Sbjct:   28 SCFPPSSH--SAFYGSSSM----INTETATMDEEDVCESYMMREITKKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFL 160          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.899e-21
Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 1
Query:  271 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLK-------RQYEAVKADREALQAQNQKLHAEIMALKSRE--------------VTESINLNKETEGSCSNRSENSSD 708
            FS I +G   N +        +    ++R + EQ+K+LE  FE   +LEP +K+Q+AR LGLQPRQVAIWFQN+RARWKTKQLEK+Y+ L+        Q+E +K ++++L ++ Q+L+ E+   K  +               TES N   E EG     S   +D
Sbjct:   11 FSEISSGMTMNKKK------MKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSSTESHNGKSEPEGRLDQGSVLCND 171          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 3.239e-21
Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  337 AGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 633
            AGE+KRR   EQ+++LE  F   + KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQLE DY  L+ +Y+A+ +  E+L+ +   L  ++  L+ R
Sbjct:   70 AGERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRER 169          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 3.239e-21
Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  337 AGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 633
            AGE+KRR   EQ+++LE  F   + KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQLE DY  L+ +Y+A+ +  E+L+ +   L  ++  L+ R
Sbjct:   70 AGERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRER 169          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.607e-20
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  319 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTP 735
            S DG     +KR+L  EQV  LE +F   +KLE ERK +LA  LGL PRQVA+WFQNRRARWK K+LE++Y+ LK  ++ V  D+  L+++  +L  ++   + RE+     L +  EG  SN S  SS + ++ + TP
Sbjct:   47 SADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAE-REIQ---RLAERVEGGSSN-SPISSSVSVEANETP 180          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.677e-20
Identity = 45/88 (51.14%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  346 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 609
            KK+RL   Q+ +LE++F+   KL+ +RK++L+R LGLQPRQ+A+WFQNRRARWK KQLE+ YD L+++Y+ V  +++ L  + +KL A
Sbjct:   78 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRA 165          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.108e-20
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 1
Query:  319 SDDGSQAGE---KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAV-----KADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRT 732
            +++G   G    +KR+L+ EQV+ LE +FE  +KLE ERK +LA  LGL PRQVA+WFQNRRARWK K++E +Y  LK  YE       + D E +  + Q   AE      RE+     L K  EG+ SN S  SS + ++ + T
Sbjct:   49 AEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAE------REIQ---RLAKRVEGTLSN-SPISSSVTIEANHT 184          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 57/140 (40.71%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  292 EEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFE--------LGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKET-EGSCS 684
            E   GE+  S +G +  +KK+++  EQ+K LE++F+           KL P+RKM+L++ LGLQPRQ+A+WFQNR+ARWK KQLE  Y+ L+++++ V  ++E LQ        E++ LKS    +S    K+T E +CS
Sbjct:   55 ESGYGEESNSFNGQE--KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQ-------EELIQLKSMIREDSSCKKKQTWEKACS 185          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.753e-19
Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  289 GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS--REVTESINLNKETEGSCSNRSENSSDIKLDISRTP 735
            G  A  E+D ++ G     +KR+L  EQV  LE +F   +KLE  RK ++A  LGL PRQVA+WFQNRRARWK K+LE++Y  LK  ++ V   +  L++Q  KL  ++   +S  R+++E +     T  S S+ S  +++   D    P
Sbjct:   54 GSSATNEEDVAEIGGML--RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLE-EMPTNSSSSSLSVEANNAPTDFELAP 201          
The following BLAST results are available for this feature:
BLAST of DC900331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX6_ORYSI2.929e-2246.36Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
ATB54_ARATH1.454e-2144.60Homeobox-leucine zipper protein ATHB-54 OS=Arabido... [more]
ATB12_ARATH1.899e-2138.32Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
HOX22_ORYSJ3.239e-2151.00Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX22_ORYSI3.239e-2151.00Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
ATB40_ARATH1.607e-2043.17Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
ATB51_ARATH4.677e-2051.14Putative homeobox-leucine zipper protein ATHB-51 O... [more]
ATB21_ARATH6.108e-2042.47Homeobox-leucine zipper protein ATHB-21 OS=Arabido... [more]
ATB22_ARATH7.977e-2040.71Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
ATB53_ARATH6.753e-1938.41Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionDC900331 VSS Citrus sinensis cDNA clone VS28681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900331 ID=DC900331; Name=DC900331; organism=Citrus sinensis; type=EST; length=1220bp
ATTCCTCATCCTTCTTTCTCAAGTTTGAACATGACAGTAAGATCATTACC
ACAGTTCTTAAGCATATTGGTGGGAAAAGTTTAGCTTAAGCTAGAGCTAG
CTAAGGTCATGTCTTGCAATGGGATGGCTTTCTTCCCAACAAATTTCATG
CTTCAAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCTCAATCC
AATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCATCTTTCT
TAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAAGAAGCA
AATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGAGAAGAA
GAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACTTTGAAT
TGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGGGCTCTT
GGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAGAGCCAG
ATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGAGACAAT
ATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAATCAGAAG
CTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGAATCTAT
AAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTGAGAACA
GTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGACAGCCCT
ATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATCAACATC
GTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCATCATCGT
CAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCAGGGTACT
AAAGATCAAGAAAGCCTTAGCAGCATGTTCTGTGGCATGGATGATCAATC
TGGATTCTGGCCATGGTTGGAGCAACACAATTTCAGTTGAAATTAATCAT
CATCGACTCCAAATAAGCTAAGTGTCAAATTGTAATATANNCGTTTCCCT
GCACTGCTATGGCAATTTGCTTACCCTAGTTTTTTTCCGTATGAGTTTCT
TGTCCATGTTTTGGTACTTGTTAGAGTGGCTTATCAAGTAGAATATAATC
AAGTTGAGTACTTTCCATGAGGGCTGAAGATCTTTGTTATGAAGAAATAA
AAGGGTATGTGTTTTTGAGT
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