DC900331

Overview
NameDC900331
Unique NameDC900331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1220
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 6.541e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  313 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 630
            D  D+G     KK RL+ EQ   LE +F+  + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ +  +L   +    S
Sbjct:  142 DDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTS 247          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.541e-14
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 1
Query:  289 GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 609
            G  + G DD          KK RL+ +Q   LE+ F+  + L P++K+ LA+ L L+ RQV +WFQNRRAR K KQ E D + LKR  + +  +   LQ +  +L A
Sbjct:  144 GGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRA 250          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.116e-13
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 1
Query:  310 DDFSDDGSQAG-----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 627
            DD  D GS +G      KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:   98 DDGGDGGSGSGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.457e-13
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  226 DFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 609
            D +  AS   +       ++  EE  G       G     KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   44 DINQPASGGEEEEFPMGSVEEDEEERGV------GGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.457e-13
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  226 DFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 609
            D +  AS   +       ++  EE  G       G     KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   44 DINQPASGGEEEEFPMGSVEEDEEERGV------GGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.457e-13
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  310 DDFSDDGSQAG-----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 627
            DD  D GS  G      KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:   98 DDGGDGGSGGGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.903e-13
Identity = 48/111 (43.24%), Postives = 57/111 (51.35%), Query Frame = 1
Query:  289 GEEANGEDDFSDDGSQ------------AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQ 585
            G    G+DD  DDG +            A  KK RL  EQ   LE +F   N L    K +LA  LGL  RQV +WFQNRRAR K KQ E D DLL+R  + + AD   L+
Sbjct:   87 GRRGRGDDD-DDDGDRRSPSGGGGDEEGASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLR 196          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.234e-12
Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 1
Query:  148 MLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSG-----IDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 609
            M  +P+        S+    PS +  D HG+  F   ++          I A    N EDD +  G +   KK RL  EQ   LE++F   + L P++K  LA  L L  RQV +WFQNRRAR K K  E + + LKR + ++K     LQ + ++L A
Sbjct:    1 MALSPNSSSLDLTISIPSFSPSPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVN-EDDSNSGGRR--RKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRA 156          
BLAST of DC900331 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.840e-11
Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = 1
Query:  277 GIDAGEEANGEDDFSDDGSQAGEKKRRLNM---EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 627
            G  +G   +G      DGS+   KK+R +    +Q++ LE +F+     + +++ QL+R LGL PRQ+  WFQNRR +            LK Q+E  +AD  AL+A+N K+  E +A++
Sbjct:    9 GSGSGSGGDGGGSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQ------------LKAQHE--RADNSALKAENDKIRCENIAIR 114          
The following BLAST results are available for this feature:
BLAST of DC900331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX7_ORYSI6.541e-1441.51Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
ATHB4_ARATH6.541e-1439.25Homeobox-leucine zipper protein ATHB-4 OS=Arabidop... [more]
HOX18_ORYSI1.116e-1344.14Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX3_ORYSJ1.457e-1336.72Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI1.457e-1336.72Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX18_ORYSJ1.457e-1344.14Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX26_ORYSJ1.903e-1343.24Putative homeobox-leucine zipper protein HOX26 OS=... [more]
ATHBX_ARATH1.234e-1233.96Homeobox-leucine zipper protein ATHB-X OS=Arabidop... [more]
HDG11_ARATH8.840e-1134.17Homeobox-leucine zipper protein HDG11 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionDC900331 VSS Citrus sinensis cDNA clone VS28681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900331 ID=DC900331; Name=DC900331; organism=Citrus sinensis; type=EST; length=1220bp
ATTCCTCATCCTTCTTTCTCAAGTTTGAACATGACAGTAAGATCATTACC
ACAGTTCTTAAGCATATTGGTGGGAAAAGTTTAGCTTAAGCTAGAGCTAG
CTAAGGTCATGTCTTGCAATGGGATGGCTTTCTTCCCAACAAATTTCATG
CTTCAAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCTCAATCC
AATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCATCTTTCT
TAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAAGAAGCA
AATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGAGAAGAA
GAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACTTTGAAT
TGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGGGCTCTT
GGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAGAGCCAG
ATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGAGACAAT
ATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAATCAGAAG
CTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGAATCTAT
AAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTGAGAACA
GTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGACAGCCCT
ATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATCAACATC
GTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCATCATCGT
CAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCAGGGTACT
AAAGATCAAGAAAGCCTTAGCAGCATGTTCTGTGGCATGGATGATCAATC
TGGATTCTGGCCATGGTTGGAGCAACACAATTTCAGTTGAAATTAATCAT
CATCGACTCCAAATAAGCTAAGTGTCAAATTGTAATATANNCGTTTCCCT
GCACTGCTATGGCAATTTGCTTACCCTAGTTTTTTTCCGTATGAGTTTCT
TGTCCATGTTTTGGTACTTGTTAGAGTGGCTTATCAAGTAGAATATAATC
AAGTTGAGTACTTTCCATGAGGGCTGAAGATCTTTGTTATGAAGAAATAA
AAGGGTATGTGTTTTTGAGT
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