CX043700

Overview
NameCX043700
Unique NameCX043700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = -3
Query:  558 TVSGYWKATGTDKAIYG--GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL--------------NDPTRQPYKHNGSMKL---DDWVLCRIYKK 788
            T  G+WKATGTD+ IY    ++ +G+KK+LVFY+GR  KG+KTDW+MHE+RL              N+  +    +N S +L   D W +CRI+KK
Sbjct:   96 TGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKK 191          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = -3
Query:  558 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPT--RQPYKHNGSMKLDD-------WVLCRIYKK 788
            T  G+WKATG DK IY     +G++K LVFYKGR P G K+DWIMHEYRL++         H+ +++  D       WV+CR++KK
Sbjct:   90 TTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKK 175          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = -3
Query:  540 TVSGYWKATGTDKAIYGGS--KYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 788
            T +GYWKATG D+ I        LG+KK LVFYKGR PKG K+ W+MHEYRL+   +  Y +  S   D+WVLC++  K    SR
Sbjct:   96 TEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDG--KFSYHYISSSAKDEWVLCKVCLKSGVVSR 178          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = -3
Query:  558 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKK 788
            TV+GYWK+TG D+AI  G + +G KK LVF++GRPP G +T+WIMHEY +++   Q       MK D +VLCRI K+
Sbjct:   87 TVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACP---DMK-DAYVLCRITKR 159          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.998e-14
Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = -3
Query:  408 TVSGYWKATGTDKAIYGGSK--YLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCS 788
            T +GYWKATG D+ I+       +G+KK LVFYKGR PKG K++W+MHEYRL    +  Y        D+WV+ R+++K    S              V + G  GG     ++        K P T S
Sbjct:   93 TEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEG--KFSYHFISRSSKDEWVISRVFQKTTLAS-----------TGAVSEGGGGGGATVSVSSGTGPSKKTKVPSTIS 208          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.998e-14
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = -3
Query:  558 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKK 788
            T SG+WKATG DK +Y     +G+KK+LV+Y G   KG KTDW+MHE+RL   T+     + + + + W LCRI+K+
Sbjct:   94 TGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTK---TDSPAQQAEVWTLCRIFKR 167          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 56/204 (27.45%), Postives = 88/204 (43.14%), Query Frame = -3
Query:  186 TVSGYWKATGTDKAIY---GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEF 788
            T SGYWKATG D+ I    G    +G+KK LV+Y+GR PKG+ T W+MHEY +   T  P          ++V+C++  K + G                     +GG     N+S+  + +V    T        LE+  P      +N +  + D   G   N   D    + L P  +   N++ +++ Q+  + P   EF
Sbjct:   83 TSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHI---TCLPQDQR------NYVICQVMYKGEDGD------------------VPSGG----NNSSEPSQSLVSDSNTVRATSPTALEFEKP----GQENFFGMSVD-DLGTPKNEQEDFSLWDVLDPDMLFSDNNNPTVHPQAPHLTPNDDEF 250          
The following BLAST results are available for this feature:
BLAST of CX043700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
NAC94_ARATH3.082e-1543.75Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC66_ARATH4.025e-1546.51NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC54_ARATH5.257e-1549.41Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC74_ORYSJ1.530e-1451.95NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC98_ARATH1.998e-1435.66Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC42_ARATH1.998e-1446.75NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC69_ARATH3.526e-1127.45NAC domain-containing protein 69 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H07-O14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043700 ID=CX043700; Name=CX043700; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGTTCTGAAATCTGGATCATTAATTTACTGAAAC
TTACTCCACAATCAGTGTAACATATATATGTTCCCAAAACCAATTTTCAC
GATTCTTGGTTAAAAATATATCTAACAAACCAATTTATATCATCTTTTTT
GTTTTTTTTGTTTTTTCGAAAATCCAAAATCACTGAAATTCGTACACCGT
TGGGTTCACAAACAATGACTGCTGGTTTAACGAGTCACTGTGGTTCACTT
GGTGCATGTCACTTGGCTGAAGTTTATTCTCGAATTGGTCATCGGAGGCA
GCATTATTGTTAATGCCGTTCTGGAAATCATAGTTAAAATTGTAAGTGTT
GTCATTGAGAAGTTGTGAAATCGGAGCAAAGTATTCCAGTTCCACTAGAT
GAGCAAGTGAACATGTCCTTGGAAATTTCACCATCAATTTCTGTTCATCA
CTAGCATTAGCATGCTCAACATAGCCTCCTGTTTTGCCTAATTGATCAAC
ACATGATTGATCTTCCTCGACTTTTGCATCCAAAACTGATCTTGATCCCG
TTTGCCTCTTTTTGTAAATCCTACAAAGTACCCAATCATCCAGTTTCATG
GAACCATTATGTTTGTAGGGTTGTCTTGTTGGGTCATTTAGCCGATATTC
ATGCATGATCCAATCAGTCTTGATCCCCTTGGGGGGCCTGCCCTTATAAA
AAACAAGAGCTTTCTTGACACCAAGATATTTAGACCCACCATATATTGCC
TTATCAGTCCCCGTGGCCTTCCAATATCCCGATACAGTTG
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