DC900329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LOX12_MOUSE (Arachidonate 12-lipoxygenase, 12S-type OS=Mus musculus GN=Alox12 PE=1 SV=4) HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21 Identity = 76/212 (35.85%), Postives = 103/212 (48.58%), Query Frame = 3 Query: 69 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 G L P+AI++ PP SSP T + W LAK V ++D + +L H L TH E +AT R L +HPI+KLL PH+RYT+EIN +R LI+ GGI + S G ++L + A + P DL RG+ +PS + YA D L +W +V+ V FY + V D ELQAW EI Sbjct: 309 GKLLPMAIQIQ-PPNPSSPAP----TLFLPSDPPLAWLLAKIWVRNSDFQLQELQFHLLNTHLVAEVIAVATMRCLPGLHPIFKLLVPHIRYTMEINTRSRTQLISDGGIFDQVVSTGGGGHVQLLTRAVAQL-TYHSLCPPDDLANRGLLR----IPSAL--------YARDALQLWEVTARYVKGMVHLFYQSDDIVRGDPELQAWCREI 502
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LX12B_MOUSE (Arachidonate 12-lipoxygenase, 12R type OS=Mus musculus GN=Alox12b PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20 Identity = 68/228 (29.82%), Postives = 102/228 (44.74%), Query Frame = 3 Query: 36 ASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAME------LSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 A + + G + P+AI+LS P P I+ + W W LAK V + H+ V H L +H E + +A R L HP+YKLL PH RY ++IN++ R L+N GG+ + S G LS YKS +P D + RG+ + + Y + D L +W A++ +V + ++Y +V D ELQ W EI Sbjct: 338 APMCLLHFGPDGNMMPIAIQLSQTPGPDCP----IFLPND---SEWDWLLAKTWVRYAEFYSHEAVAHLLESHLIGEAFCLALLRNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSL------CIPNDFVERGVQD------------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEI 540
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LX12B_RAT (Arachidonate 12-lipoxygenase, 12R type OS=Rattus norvegicus GN=Alox12b PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 69 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAME------LSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 G + P+AI+LS P P I+ + W W LAK V + H+ V H L +H E + +A R L HP+YKLL PH RY ++IN++ R L+N GG+ + S G LS YKS +P D + RG+ + + Y + D L +W A++ +V + ++Y +V D ELQ W EI Sbjct: 349 GNMMPIAIQLSQTPGPDCP----IFLPND---SEWDWLLAKTWVRYAEFYSHEAVAHLLESHLIGEAFCLALLRNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSL------CIPNDFVERGVQD------------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEI 540
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 73/220 (33.18%), Postives = 113/220 (51.36%), Query Frame = 3 Query: 48 VFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 + + N A + P+AI+L+ P +P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +RQL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A + + P + RGM + ED I Y Y DGLL+W AI+ + V+ +Y + V D ELQ + ++ Sbjct: 311 LLYKNLANKIVPIAIQLNQAPGEKNP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLCTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGMDSTED----------IPYYFYRDDGLLVWEAIQSFTSEVVSIYYEDDQVVMEDQELQDFVKDV 512
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 3 Query: 48 VFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 + + N A + P+AI+L+ P S+P I+ + + W LAK V S+D VHQ + H L TH E + IA +RQL ++HP++KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A + + P + RGM + MP Y Y DGLL+W AI+ + V+ +Y V D ELQ + ++ Sbjct: 312 LLYKNLANKIVPIAIQLNQTPGESNP----IFL---PTDSKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGM-DSTEDMPF--------YFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDV 513
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.308e-19 Identity = 72/219 (32.88%), Postives = 111/219 (50.68%), Query Frame = 3 Query: 48 VFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 + + N A + P+AI+L+ P +P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +RQL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K + P + RGM ++ I Y Y DGLL+W AI+ + V +Y V D ELQ + +++ Sbjct: 312 LLYKNLANKIVPIAIQLNQIPGDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDL-TYASLCFPEAIKARGMESKED---------IPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDV 513
BLAST of DC900329 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19 Identity = 66/219 (30.14%), Postives = 109/219 (49.77%), Query Frame = 3 Query: 48 VFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 701 + + N A + P+AI+L+ P +P I+ + + W LAK V S+D +HQ + H L TH E + IA +RQL ++HP++KLL H+R+T+ IN AR+ L G+ + A+ + G +++ A + + P + RGM + I Y Y DGLL+W AI+ + V+ +Y + V D ELQ + ++ Sbjct: 311 LLYKNLANKIVPIAIQLNQTPGEKNP----IFL---PTDSKYDWLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGMDNTED---------IPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDV 512 The following BLAST results are available for this feature:
BLAST of DC900329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900329 ID=DC900329; Name=DC900329; organism=Citrus sinensis; type=EST; length=826bpback to top |