DC900325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 5.090e-72 Identity = 119/211 (56.40%), Postives = 157/211 (74.41%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTL 694 M FVK K+KAY+ R+QV+++RRREGKTDY+ R RLI QDKNKYN+PKYR V R TN D+IAQ+V + IVGD VL AAYAHELPR+G++VGLTNYA+ Y TGLLLARR+L L++ D Y+G + G+ + V+P D + RPF+A LDVGL +T+TG +VF +PH + RFAG++ + K+L+AE R YI+G HVA+YM+ L Sbjct: 1 MGFVKVVKTKAYYSRYQVQFRRRREGKTDYQQRHRLITQDKNKYNSPKYRLVARITNTDVIAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLL 211 HSP 2 Score: 50.0618 bits (118), Expect = 5.090e-72 Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKL 905 EDE + Y+ F++YIK G+ +E +Y H AIRA+P + K+ K NL K T +++KA++ Sbjct: 214 EDE-DAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANPAPAAKSTKSYKDIKSKNLSKRTLKQKKARV 281
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.636e-72 Identity = 126/214 (58.88%), Postives = 155/214 (72.43%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQ---LDAEVHRKYIYGGHVAAYMSTL 694 M F++ K+KAYF+RFQVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL YG++VGLTNYAAAYCTGLLLARR+L L++D ++ G VEA GE Y VE D RRPF+ALLDVG+ TTGNRVF +PHS+KRF G+S D + DA+ HR I+G HVA YM L Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYL 214 HSP 2 Score: 48.9062 bits (115), Expect = 6.636e-72 Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLT 881 E++PEKY+ F+ Y+K G+D++ LE +Y H IR +P + K K H R K LT Sbjct: 216 EEDPEKYKKQFSAYLKLGLDSESLEDMYASAHENIRKNPVLPTKPKRKLK-HVREGSKVLT 275
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.472e-71 Identity = 126/215 (58.60%), Postives = 157/215 (73.02%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSK--DG--KQLDAEVHRKYIYGGHVAAYMSTL 694 MAFVKA K+KAYFKRFQVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN ++ Q++ A + GD ++ +A + EL RYG++VGLTNY+AAY TGLLLARR+LK + DE++G + +GE+Y +E ++ RRPF+ +LDVG++ TT GNRVF IPHS+KRF GF+K DG + EVHR IYG HVA YM TL Sbjct: 1 MAFVKAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTL 215 HSP 2 Score: 49.6766 bits (117), Expect = 1.472e-71 Identity = 29/97 (29.90%), Postives = 51/97 (52.58%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSE-------------KPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEED 950 E++PE+YQ+ F+ YI+ ID D +E +Y++ IRA+P K E K A ++ R KL E RK ++++++ + + EE+ Sbjct: 217 EEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANPDPVKKEAREVKRVRQGAMIKTAKSQYVRN--VKLDKETRKERVLKKIQMVADKMAEEE 311
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.753e-69 Identity = 118/212 (55.66%), Postives = 143/212 (67.45%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLM 697 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG+RVF IPHS RF GF + ++LD E RKYIYGGHVA YM L+ Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLI 212 HSP 2 Score: 59.3066 bits (142), Expect = 1.753e-69 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPA---PKEHKRYNLKKLTYEERKAKLVERLNA 923 +D+ E+YQ F+ I GI++D LE +Y + +A IR DP+ +KS K A E +Y +KLT EERK ER NA Sbjct: 213 DDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNA 286
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 6.612e-69 Identity = 118/212 (55.66%), Postives = 143/212 (67.45%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLM 697 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG+RVF IPHS RF GF + ++LD E RKYIYGGHVA YM L+ Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLI 212 HSP 2 Score: 57.3806 bits (137), Expect = 6.612e-69 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPA---PKEHKRYNLKKLTYEERKAKLVERLNA 923 +D+ E+YQ F+ I GI++D LE +Y + +A IR DP+ +KS K A E ++ +KLT EERK ER NA Sbjct: 213 DDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNA 286
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 3.271e-44 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 2 Query: 65 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVE 436 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y G VE Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.037e-40 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 953 EDEPEKYQSHF+ YIK + D +E +YKKVHAAIR DP+ KKS+K PK HKRYNLKKLTYEERKAKL+ERLNALN+A +D+ Sbjct: 31 EDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGGNDDD 115 HSP 2 Score: 57.3806 bits (137), Expect = 7.037e-40 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 2 Query: 611 SKDGKQLDAEVHRKYIYGGHVAAYMSTLM 697 SKD KQLDAEVHRKYIYGGHVAAYM+ LM Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILM 30
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL18_METHJ (50S ribosomal protein L18P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.452e-17 Identity = 71/216 (32.87%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 107 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMGG*AREVSISLHRVHQERN 754 R+ V ++RRREG+T+Y AR RL+ K R VVR TN+ II QI++A++ GD AA + EL ++G E L N AAY TG+LLA R LK G++ A+LD+GL + T G RVF IPH++ + L A+ K G H+A Y G V+ ++ + E N Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK--------------AGQE------------GAILDIGLHRATPGARVFAALKGAVEAGFDIPHNE----------EILPADERCK---GEHIAEYAPDRAGNLPANVAATVDAIMGELN 175
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL18_META3 (50S ribosomal protein L18P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl18p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.477e-17 Identity = 62/200 (31.00%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 95 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTL 694 A+ +++V ++RRREGKT++R R++L+ TP R V R + +I+AQIV + VGD ++ +A++ E+ + G + N AAY TGLLL ++ LK EGN E A+LD+GL T G V IPHS++ G + I G HV Y L Sbjct: 2 AHGAKYRVPFRRRREGKTNFRLRLKLLLS-----RTP--RLVARKSLNNIVAQIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALK--------EGNEE------------------AILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDR-------------INGSHVKEYAELL 155 HSP 2 Score: 27.7202 bits (60), Expect = 9.477e-17 Identity = 12/35 (34.29%), Postives = 22/35 (62.86%), Query Frame = 3 Query: 699 EDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAI 803 EDE EKY F++Y+K G++ + L ++++ I Sbjct: 158 EDE-EKYNKQFSKYLKNGLNPEDLPEHFEEIKEKI 191
BLAST of DC900325 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.922e-16 Identity = 56/166 (33.73%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 95 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSD 592 A+ R+++ ++RRREGKTDYRAR +++ T K R VVR T +IAQI++ + GD L +A++ +L + G G +N AAAY TG L +R LK EG E A+LD+GL G++VF +PH + Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE 134 The following BLAST results are available for this feature:
BLAST of DC900325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900325 ID=DC900325; Name=DC900325; organism=Citrus sinensis; type=EST; length=1150bpback to top |