CX043692

Overview
NameCX043692
Unique NameCX043692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.963e-109
Identity = 197/214 (92.06%), Postives = 205/214 (95.79%), Query Frame = 1
Query:  184 MESCNCI-EPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIQLPV 822
            +ESCNCI +PQ PAD+LLMKYQYISDFFIALAYFSIP+ELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMH+R VAIVMTT K LTA+VSC TALMLVHIIPDLLSVKTRELFLK KAA+LDREMG+IRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLR QNPVG TVPIQLPV
Sbjct:   15 VESCNCIIDPQLPADDLLMKYQYISDFFIALAYFSIPVELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMHTRNVAIVMTTPKALTALVSCITALMLVHIIPDLLSVKTRELFLKKKAAQLDREMGIIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRHQNPVGLTVPIQLPV 228          
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: ETR2_SOLLC (Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.939e-104
Identity = 186/210 (88.57%), Postives = 197/210 (93.81%), Query Frame = 1
Query:  193 CNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIQLPV 822
            CNC +P  PADELLMKYQYISDFFIA+AYFSIP+EL+YFV+KSAVFPYRWVLVQFGAFIVLCGATHLINLWT   H+RTVA+VMTTAK  TA VSCATA+MLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGR+VRMLTHEIRSTLDRHTILKTTLVELGR L LEECALWMPTRTG+ELQLSYTL  QNPVG+TVPIQLPV
Sbjct:    3 CNCFDPLLPADELLMKYQYISDFFIAVAYFSIPIELVYFVQKSAVFPYRWVLVQFGAFIVLCGATHLINLWTSTPHTRTVAMVMTTAKFSTAAVSCATAVMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRYVRMLTHEIRSTLDRHTILKTTLVELGRALQLEECALWMPTRTGVELQLSYTLHHQNPVGFTVPIQLPV 212          
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: ERS1_ARATH (Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.028e-90
Identity = 166/213 (77.93%), Postives = 183/213 (85.92%), Query Frame = 1
Query:  184 MESCNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIQLPV 822
            MESC+C E     D+LL+KYQYISD  IALAYFSIPLELIYFV+KSA FPY+WVL+QFGAFI+LCGATH INLW F MHS+ VAIVMT AKV  AVVSCATALMLVHIIPDLLSVK RELFLK KA ELDREMGLI TQEETGRHVRMLTH IR TLDRHTIL+TTLVELG+TL LEECALWMP+++GL LQLS+TL  +  VG +VPI LP+
Sbjct:    1 MESCDCFETHVNQDDLLVKYQYISDALIALAYFSIPLELIYFVQKSAFFPYKWVLMQFGAFIILCGATHFINLWMFFMHSKAVAIVMTIAKVSCAVVSCATALMLVHIIPDLLSVKNRELFLKKKADELDREMGLILTQEETGRHVRMLTHGIRRTLDRHTILRTTLVELGKTLCLEECALWMPSQSGLYLQLSHTLSHKIQVGSSVPINLPI 213          
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: ETR2_ARATH (Ethylene receptor 2 OS=Arabidopsis thaliana GN=ETR2 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.304e-55
Identity = 112/204 (54.90%), Postives = 145/204 (71.08%), Query Frame = 1
Query:  193 CNCIEPQ---WPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFNMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVG 795
            CNC +     W  + +L + Q +SDF IA+AYFSIP+EL+YFV  S V P++WVL +F AFIVLCG THL++ WT++ H   + +  T  K+LTA+VSCATA+ L+ +IP LL VK RE  LK KA EL RE+GLI  ++ETG HVRMLT EIR +LDRHTIL TTLVEL +TL L+ CA+WMP   G E+ L++ LR +   G
Sbjct:   32 CNCEDEGNSFWSTENIL-ETQRVSDFLIAVAYFSIPIELLYFVSCSNV-PFKWVLFEFIAFIVLCGMTHLLHGWTYSAHPFRLMMAFTVFKMLTALVSCATAITLITLIPLLLKVKVREFMLKKKAHELGREVGLILIKKETGFHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNDGGTEMDLTHELRGRGGYG 233          
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: EIN4_ARATH (Protein EIN4 OS=Arabidopsis thaliana GN=EIN4 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 104/202 (51.49%), Postives = 141/202 (69.80%), Query Frame = 1
Query:  190 SCNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTF-NMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPV 792
            SCNC +  + +   +++ Q +SD  IA+AYFSIPLEL+YF+  S V P++WVLVQF AFIVLCG THL+N WT+   HS  + + +T  K LTA+VSCATA+ L+ +IP LL  K REL+LK    EL+ E+GL++ Q+E    VRMLT EIR +LD+H IL+TTLVEL + L L+  A+WMP     E+ L++ LR  NP+
Sbjct:   26 SCNCDDEGFLSVHTILECQRVSDLLIAIAYFSIPLELLYFISFSNV-PFKWVLVQFIAFIVLCGMTHLLNAWTYYGPHSFQLMLWLTIFKFLTALVSCATAITLLTLIPLLLKWKVRELYLKQNVLELNEEVGLMKRQKEMSVQVRMLTREIRKSLDKHMILRTTLVELSKILDLQNSAVWMPNENRTEMHLTHELR-ANPM 225          
BLAST of CX043692 vs. ExPASy Swiss-Prot
Match: ERS2_ARATH (Ethylene response sensor 2 OS=Arabidopsis thaliana GN=ERS2 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.096e-48
Identity = 101/197 (51.27%), Postives = 132/197 (67.01%), Query Frame = 1
Query:  193 CNCI-EPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAV-FPYRWVLVQFGAFIVLCGATHLINLWTFNMHSRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLR 777
            CNC  E    + E ++  Q + DF IA+AYFSIP+EL+YFV ++ V  PY WV+ +F AFIVLCG THL+  +T+  H   V   +T  K+LT +VS  TAL LV ++P LL  K RE  L  K  ELDRE+G+I  Q ET  HVRMLT +IR++LDRHTIL TTLVEL +TL L+ CA+W+P     E+ L++ LR
Sbjct:   34 CNCDDEDSLFSYETILNSQKVGDFLIAIAYFSIPIELVYFVSRTNVPSPYNWVVCEFIAFIVLCGMTHLLAGFTYGPHWPWVMTAVTVFKMLTGIVSFLTALSLVTLLPLLLKAKVREFMLSKKTRELDREVGIIMKQTETSLHVRMLTTKIRTSLDRHTILYTTLVELSKTLGLKNCAVWIPNEIKTEMNLTHELR 230          
The following BLAST results are available for this feature:
BLAST of CX043692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ETR1_SOLLC3.963e-10992.06Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR2_SOLLC2.939e-10488.57Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR... [more]
ERS1_ARATH7.028e-9077.93Ethylene response sensor 1 OS=Arabidopsis thaliana... [more]
ETR2_ARATH4.304e-5554.90Ethylene receptor 2 OS=Arabidopsis thaliana GN=ETR... [more]
EIN4_ARATH7.110e-5051.49Protein EIN4 OS=Arabidopsis thaliana GN=EIN4 PE=1 ... [more]
ERS2_ARATH5.096e-4851.27Ethylene response sensor 2 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H01-O2-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043692 ID=CX043692; Name=CX043692; organism=Citrus sinensis; type=EST; length=823bp
TGAAAATAGACCCTCGAATTGTAAAGCAGATCGTCAAAGTGGTTCTCATG
AATTACTCACGGGCCTAGGAAGGGGGGAAAAATTAAAAAAAATCTAACGC
CATCTTCATTTTTCAAAGCTAATTACATTTTTAAGCAAAAGGTATGTAAA
GGAGGGAGAATTGGCTAAGGTGGTTCAATCAAAATGGAGTCTTGCAATTG
CATTGAGCCACAATGGCCAGCTGATGAACTGTTGATGAAATATCAATATA
TTTCAGATTTCTTCATTGCGCTTGCTTATTTTTCCATTCCTCTAGAACTG
ATCTACTTTGTTAAGAAATCTGCCGTGTTTCCATATAGATGGGTCCTTGT
GCAGTTTGGTGCTTTCATTGTTCTGTGTGGGGCAACGCATCTGATTAATT
TGTGGACGTTTAACATGCATTCAAGGACTGTGGCTATCGTAATGACCACT
GCAAAGGTTTTGACTGCTGTGGTCTCATGTGCAACTGCCCTAATGCTCGT
GCATATTATTCCTGACTTGTTGAGTGTTAAAACTAGAGAACTGTTTTTGA
AGAACAAGGCTGCTGAGCTCGATAGAGAAATGGGGCTGATCCGTACACAA
GAAGAAACAGGTAGACACGTTAGGATGTTGACTCATGAGATCAGAAGCAC
TCTTGATAGGCACACCATATTGAAGACCACTCTTGTTGAATTGGGTAGAA
CTTTGGCACTGGAAGAGTGTGCTTTGTGGATGCCAACTCGTACTGGTTTG
GAACTTCAACTATCGTATACACTTCGTCAGCAGAATCCTGTTGGATATAC
TGTACCCATCCAGCTTCCTGTTA
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