CX043678

Overview
NameCX043678
Unique NameCX043678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.883e-22
Identity = 63/160 (39.38%), Postives = 89/160 (55.62%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR-----HQH--------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEAN--SDKIEDKSAAARRLDFQIGWY 647
            GI P VT++HWD P  L +  GG+L+  I+K F  YA+  F  +GD+VK+WIT NEP   +  GY  G  APGR      +H        S  E Y+V+H+ +LAHA A   + RK    +GG IG+     W EA+  SD+ E ++     +DF +GW+
Sbjct:  150 GITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDFTEYANFTFQEYGDKVKHWITFNEPWVFSRAGYDIGNKAPGRCSKYIKEHGEMCHDGRSGHEAYIVSHNMLLAHADAVDAF-RKCDKCKGGKIGIAHSPAWFEAHELSDE-EHETPVTGLIDFILGWH 307          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGLA_THENN (Beta-glucosidase A OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=bglA PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.459e-22
Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = -2
Query:  246 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 653
            +K I P++T+YHWDLP  L + +GGW N++I  +F  Y+   F +FGDRVK+WIT+NEP   A+ G+  G+ APG         +   H+ + AHA +  V++   KD   G IG+V +  + E  S++ ED  AA
Sbjct:  108 EKNITPFITIYHWDLPFSL-QLKGGWANRDIADWFAEYSRVLFENFGDRVKHWITLNEPWVVAIVGHLYGVHAPG--MKDIYVAFHTVHNLLRAHAKSVKVFRETVKD---GKIGIVFNNGYFEPASEREEDIRAA 237          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGLA_THENE (Beta-glucosidase A (Fragment) OS=Thermotoga neapolitana GN=bglA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.459e-22
Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = -2
Query:  246 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 653
            +K I P++T+YHWDLP  L + +GGW N++I  +F  Y+   F +FGDRVK+WIT+NEP   A+ G+  G+ APG         +   H+ + AHA +  V++   KD   G IG+V +  + E  S++ ED  AA
Sbjct:  108 EKNITPFITIYHWDLPFSL-QLKGGWANRDIADWFAEYSRVLFENFGDRVKHWITLNEPWVVAIVGHLYGVHAPG--MKDIYVAFHTVHNLLRAHAKSVKVFRETVKD---GKIGIVFNNGYFEPASEREEDIRAA 237          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL24_ARATH (Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGLU24 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.459e-22
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ---------------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAA-RRLDFQIGWY 653
            + GI P+VT++HWD P  L    GG+L+  IVK F  YA+  F  +G +VK+WIT NEP   A  GY  G  APGR                  S  E YLV+H+ + AHA A   +++  K K GG IG+     W E +  K E   A   R LDF +GW+
Sbjct:  150 RNGIIPFVTVFHWDTPQTLENEYGGFLSAHIVKDFREYAEFVFKEYGGKVKHWITFNEPWVFAHAGYDVGKKAPGRCSPYAKDETVKGDCLGGRSGYEAYLVSHNLLNAHAEAVEAFRQCEKCK-GGKIGIAHSPAWFEPHDFKDEQSGATIDRALDFIMGWH 311          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.212e-22
Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 647
            G+ P +TLYHWDLP  + E  GGW  +E +++F+ YA      FG+R+  W TINEP   ++ GY TG  APG    +  E +  AHH ++ H  A ++++ K      G IG+ ++ E  +A S++ ED +AA RR  F   W+
Sbjct:  113 GLIPMLTLYHWDLPQWI-EDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG--HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWF 251          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.478e-22
Identity = 60/158 (37.97%), Postives = 83/158 (52.53%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE---ANSDKIEDKSAAARRLDFQIGWY 647
            G+ P VTL+ WD+P  L +  GG+L+  I++ F  +A   F  +GDRVK+W+TINEP + +  GY TG  APGR             S  E Y V+H+ +LAHA A   + RK     GG IG+V    W E     S     +    R +DF +GW+
Sbjct:  148 GVTPLVTLFQWDVPQALEDEYGGFLSDRILEDFRDFAQFAFNKYGDRVKHWVTINEPYEFSRGGYETGEKAPGRCSKYVNEKCVAGKSGHEVYTVSHNLLLAHAEAVEEF-RKCGKCTGGKIGIVQSPMWFEPYDKKSTSSPSEEIVKRAMDFTLGWH 304          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL09_ORYSJ (Putative beta-glucosidase 9 OS=Oryza sativa subsp. japonica GN=BGLU9 PE=5 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.155e-22
Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = -2
Query:  333 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 650
            KG+Q +VTL+H+D P  L +   G+L+  I+  ++ YA+ CF  FGDRVK+WIT NEP       Y +G +APGR             S  EPY   HHQ+LAHA    +Y+ KY+
Sbjct:  150 KGVQSFVTLFHYDTPQALEDKYNGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWIFCSKAYASGTYAPGRCSPWEMGKCSVGDSGREPYTACHHQLLAHAETVRLYREKYQ 265          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL02_ARATH (Putative beta-glucosidase 2 OS=Arabidopsis thaliana GN=BGLU2 PE=5 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20
Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = -2
Query:  216 YFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH-----SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL-VVDCEWAEANSDKIEDKSAAARRLDFQIGW 554
            YF  YAD CF  FG+ VK W TINE     + GY  G   PGR  +     SSTE Y+V H+ +LAHA+   +YQ+KYKDKQGG++G  +   E+    S   +D+ A  R  DF  GW
Sbjct:   26 YFTAYADVCFREFGNHVKFWTTINEANVFTIGGYNDGTSPPGRCSNCSSGNSSTETYIVGHNLLLAHASVSRLYQQKYKDKQGGSVGFSLYAFEFIPQTSSSKDDEIAIQRAKDFFYGW 144          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.404e-19
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 647
            GI+P+ TLYHWDLP  L ++ GGW N+  ++ F  +A+T F  F  ++++W+T NEP   A      G+ APG     +     V HH ++AH  +     R++++    G IG+  +  WA   S   EDK+A AR +     W+
Sbjct:  112 GIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWF 250          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.404e-19
Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR--------HQH-----SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 653
            +  I P VT++HWD P  L +  GG+L+  IV+ F  YA+  F  +G +VK+WIT NEP   +  GY  G  APGR         QH     S  E Y V+H+ +L+HA A   + R  K   GG IG+     W E   D      +  R LDF +GW+
Sbjct:  150 KNNIIPLVTVFHWDTPQDLEDEYGGFLSGRIVQDFTEYANFTFHEYGHKVKHWITFNEPWVFSRAGYDNGKKAPGRCSPYIPGYGQHCQDGRSGYEAYQVSHNLLLSHAYAVDAF-RNCKQCAGGKIGIAHSPAWFEP-QDLEHVGGSIERVLDFILGWH 307          
The following BLAST results are available for this feature:
BLAST of CX043678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
BGL20_ARATH1.883e-2239.38Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]
BGLA_THENN2.459e-2239.71Beta-glucosidase A OS=Thermotoga neapolitana (stra... [more]
BGLA_THENE2.459e-2239.71Beta-glucosidase A (Fragment) OS=Thermotoga neapol... [more]
BGL24_ARATH2.459e-2239.26Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGL... [more]
BGLB_PAEPO3.212e-2237.93Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]
BGL25_ARATH5.478e-2237.97Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL09_ORYSJ7.155e-2242.24Putative beta-glucosidase 9 OS=Oryza sativa subsp.... [more]
BGL02_ARATH1.349e-2044.54Putative beta-glucosidase 2 OS=Arabidopsis thalian... [more]
BGLA_PAEPO7.404e-1934.25Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
BGL18_ARATH7.404e-1937.50Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043678 ID=CX043678; Name=CX043678; organism=Citrus sinensis; type=EST; length=654bp
TTTTTTTTTTTTTTTTTAAAGGAAAACAAAACGGAGATGTGCCACCAGCT
CAAATATAAATATTTGCATTGTAAAAAAGAAGAGATGGAATGATTTGCAA
TTTAAAGAATCAGACTTGGCGAACTATAAGTTTTATTTTTGCACCAAATT
ATCCAAACAACACCATTAATTAACTAATTCAAGGAAATAACATTTACTGA
GTATTTCAAGCAGTACCATCCAATCTGGAAATCAAGGCGCCTCGCTGCTG
CAGATTTATCTTCAATTTTATCTGAATTAGCCTCAGCCCATTCACAATCT
ACCACCAACCCTATGTTTCCCCCTTGCTTATCCTTATACTTTCTTTGGTA
TACTGAAAATGCTGCAGCATGGGCCAAGATCTGGTGGTGAGCAACCAAAT
ATGGCTCTGTTGATGAATGCTGATGTCTTCCAGGAGCAAATATCCCAGTA
CAATACCCATTAACCGCAGTTTGTAGGGGCTCATTTATTGTAATCCAATT
CTTTACTCTATCGCCAAAACTTGCAAAGCAAGTATCTGCATAAATTTCAA
AATATTTTACTATTTCCTTATTTAACCACCCACCCCTTGACTCAGGAAGA
TGCAAAGGAAGATCCCAATGGTACAATGTTACATAAGGCTGAATACCCTT
TTGA
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