CX043678

Overview
NameCX043678
Unique NameCX043678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.801e-34
Identity = 69/156 (44.23%), Postives = 89/156 (57.05%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 650
            KG+QP++TL+HWD P  L +   G+L+  I+  F+ YA+ CF  FGDRVKNWIT NEP     NGY TG+FAPGR             S  EPY   HHQ+LAHA    +Y+ KY+  Q G IG+ +   W    S    +  AA R +DF  GW+
Sbjct:  147 KGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWF 302          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.658e-34
Identity = 72/150 (48.00%), Postives = 96/150 (64.00%), Query Frame = -2
Query:  213 IQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 644
            I PYV LYH+DLP  L +   GWL+  IV+ F  +AD CF ++G +VKNW TINEP   A +GY  G F PGR        +S+TEPY+ AH+ +L+HAAA   Y+ KY+  Q G IG+++D  W E  +DK ED +AA R  +F +GWY
Sbjct:  138 IIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCTGCQPGGNSATEPYIAAHNLLLSHAAAVRTYRDKYQAIQKGKIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWY 287          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.658e-34
Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 650
            KG+ P+VT++HWD PL L    GG+L+++IVK +  +A+ CF  FGDRVK W T NEP   +  GY  G+FAPGR             SS EPYLVAHH  L+HAAA  +Y+ KY+  Q G IG+VV   W     +   D+ A  R LDF  GW+
Sbjct:  139 KGMIPFVTIFHWDTPLALESKYGGFLSEDIVKEYVDFAEVCFREFGDRVKYWTTFNEPFTYSAYGYGKGVFAPGRCSSYVSKSCGVGDSSREPYLVAHHIHLSHAAAVQLYRTKYQPTQKGQIGMVVVTHWFVPYDNSDADRGAVQRSLDFIYGWF 294          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL13_ARATH (Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGLU13 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.658e-34
Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = -2
Query:  183 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYCL-----KYSVNVIS 650
            KGI+P+ T++HWD P  L ++ GG+   EIV  F  YAD CF +FGDRVK+W+T+NEPL     GY  G+ APGR            + +TEPY+V H+ ILAH  A  VY+ KYK  Q G +G+ ++  W    ++  ED+ AAAR + F   ++       KY V++++
Sbjct:  144 KGIKPFATIFHWDTPQSLEDAYGGFFGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTAGNGATEPYIVGHNLILAHGEAVKVYREKYKASQKGQVGIALNAGWNLPYTESAEDRLAAARAMAFTFDYFMEPLVTGKYPVDMVN 314          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL38_ARATH (Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34
Identity = 77/156 (49.36%), Postives = 91/156 (58.33%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 650
            K + P+VTL+HWDLP  L +   G+LNK IV  F+ YAD CF  FGDRVKNWITIN+       GY  G  APGR            +SSTEPY+VAH+Q+LAHAAA  VY+ KYKD Q G IG V+   W        E K A  R   F  GW+
Sbjct:  149 KNMTPFVTLFHWDLPQTLQDEYNGFLNKTIVDDFKDYADLCFELFGDRVKNWITINQLYTVPTRGYALGTDAPGRCSPKIDVRCPGGNSSTEPYIVAHNQLLAHAAAVDVYRTKYKDDQKGMIGPVMITRWFLPFDHSQESKDATERAKIFFHGWF 304          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34
Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 650
            KG+QP+VTL+HWD P  L +   G+L+  I+  ++ YA+TCF  FGDRVK+WIT NEP      GY +GI APGR             S  EPY   HHQ+LAHA    +Y+ KY+  Q G IG++++ +W    S       AA R LDF +GW+
Sbjct:  147 KGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEVGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWF 302          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34
Identity = 69/155 (44.52%), Postives = 97/155 (62.58%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH----------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 647
            GIQP+VT+YH+DLP  L +  GG L+   ++ +  YA+ CF +FGDRVK+W T N+P    + G+  G   P R  +          SSTEPY+VAHH +LAHA+A S+Y++KY+  QGG IG+ +   W E  +DK  D +AA R  +F IGW+
Sbjct:  141 GIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYSAYAEVCFKNFGDRVKHWATFNQPNIEPIGGFDAGDRPPRRCSYPFGTNCTGGDSSTEPYIVAHHLLLAHASAVSIYRQKYQAIQGGQIGITLMVRWHEPYTDKTADAAAAIRMNEFHIGWF 295          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 70/153 (45.75%), Postives = 97/153 (63.40%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 653
            ++G+ PYV L H+DLPL L +   GWL+ +IV  F  YA+ CF ++GDRVKNW T NEP   A  G+ TG   P R        +S+TEPY+VAH+ IL+HA A   Y+ K++  Q G IG+V+D  W E  ++  ED++AA R  DF +GW+
Sbjct:  154 KQGLIPYVNLNHYDLPLALQKKYEGWLSPKIVGVFSDYAEFCFKTYGDRVKNWFTFNEPRIVAALGHDTGTDPPNRCTKCAAGGNSATEPYIVAHNIILSHATAVDRYRNKFQASQKGKIGIVLDFNWYEPLTNSTEDQAAAQRARDFHVGWF 306          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33
Identity = 69/171 (40.35%), Postives = 102/171 (59.65%), Query Frame = -2
Query:  183 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYCL-----KYSVNVIS 650
            KGI+P+ T++HWD P  L ++ GG+   EIV  F  YAD CF +FGDRVK+W+T+NEPL     GY  G+ APGR            + +TEPY+V H+ IL+H AA  VY+ KYK  Q G +G+ ++  W    ++  +D+ AAAR + F   ++       KY V++++
Sbjct:  144 KGIKPFATMFHWDTPQALEDAYGGFRGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTDGNGATEPYIVGHNLILSHGAAVQVYREKYKASQQGQVGIALNAGWNLPYTESPKDRLAAARAMAFTFDYFMEPLVTGKYPVDMVN 314          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.044e-33
Identity = 73/155 (47.10%), Postives = 91/155 (58.71%), Query Frame = -2
Query:  216 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR---------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 653
            +KGI P+VTL H+D P  L      WL+ E+ K F   AD CF  FGDRVK+WITINEP Q     Y +G+F P R         H +S TEP++ AH+ ILAHA A  +Y+ KY+ +Q G IG+VV   W E  SD I DK+AA R   F   W
Sbjct:  141 KKGITPFVTLNHFDYPQELENRFKSWLSSEMQKDFGYLADICFKHFGDRVKHWITINEPNQHISLAYRSGLFPPARCSMPYGNCTHGNSETEPFIAAHNMILAHAKAIQIYRTKYQREQKGIIGIVVQTSWFEPISDSIADKNAAERAQSFYSNW 295          
The following BLAST results are available for this feature:
BLAST of CX043678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
BGL12_ORYSJ2.801e-3444.23Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL38_ORYSJ3.658e-3448.00Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL30_ORYSJ3.658e-3446.15Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL13_ARATH3.658e-3440.94Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGL... [more]
BGL38_ARATH4.777e-3449.36Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 ... [more]
BGL11_ORYSJ4.777e-3443.59Beta-glucosidase 11 OS=Oryza sativa subsp. japonic... [more]
BGL33_ORYSJ8.149e-3444.52Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
BGL08_ORYSJ1.390e-3345.75Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL15_ARATH2.371e-3340.35Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]
BGL46_ARATH4.044e-3347.10Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043678 ID=CX043678; Name=CX043678; organism=Citrus sinensis; type=EST; length=654bp
TTTTTTTTTTTTTTTTTAAAGGAAAACAAAACGGAGATGTGCCACCAGCT
CAAATATAAATATTTGCATTGTAAAAAAGAAGAGATGGAATGATTTGCAA
TTTAAAGAATCAGACTTGGCGAACTATAAGTTTTATTTTTGCACCAAATT
ATCCAAACAACACCATTAATTAACTAATTCAAGGAAATAACATTTACTGA
GTATTTCAAGCAGTACCATCCAATCTGGAAATCAAGGCGCCTCGCTGCTG
CAGATTTATCTTCAATTTTATCTGAATTAGCCTCAGCCCATTCACAATCT
ACCACCAACCCTATGTTTCCCCCTTGCTTATCCTTATACTTTCTTTGGTA
TACTGAAAATGCTGCAGCATGGGCCAAGATCTGGTGGTGAGCAACCAAAT
ATGGCTCTGTTGATGAATGCTGATGTCTTCCAGGAGCAAATATCCCAGTA
CAATACCCATTAACCGCAGTTTGTAGGGGCTCATTTATTGTAATCCAATT
CTTTACTCTATCGCCAAAACTTGCAAAGCAAGTATCTGCATAAATTTCAA
AATATTTTACTATTTCCTTATTTAACCACCCACCCCTTGACTCAGGAAGA
TGCAAAGGAAGATCCCAATGGTACAATGTTACATAAGGCTGAATACCCTT
TTGA
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