CX043678

Overview
NameCX043678
Unique NameCX043678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: MYRO_BRANA (Myrosinase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR--------HQ----HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEW----AEANSDKIEDKSAAARRLDFQIGWY 653
            +K I P+VTL+HWDLP  L +   G+L+++I++ F+ YAD CF  FG +VK+WITIN+       GY  G  APGR        H+    +SSTEPY+VAH+Q+LAHA    +Y+ KYK  Q G IG V+   W     E++   IE   AA R   F  GWY
Sbjct:  150 EKNITPFVTLFHWDLPQTLQDEYEGFLDRQIIQDFKDYADLCFKEFGGKVKHWITINQLYTVPTRGYAIGTDAPGRCSPMVDTKHRCYGGNSSTEPYIVAHNQLLAHATVVDLYRTKYK-FQKGKIGPVMITRWFLPFDESDPASIE---AAERMNQFFHGWY 308          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: GBA3_CAVPO (Cytosolic beta-glucosidase OS=Cavia porcellus GN=Gba3 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 64/146 (43.84%), Postives = 91/146 (62.33%), Query Frame = -2
Query:  213 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKSAAARRLDFQIGWY 647
            G+ P VTLYH+DLP  L E +GGWL++ I++ F+ YA  CF++FG+RV+ WITINEP      GY  G FAPG  Q   T  Y  AH+ I AHA A+  Y   +++KQ G + L + C W +  N + + D+ AA R ++FQ  ++
Sbjct:  111 GVTPVVTLYHFDLPQAL-EDQGGWLSEAIIEVFDKYAQFCFSTFGNRVRQWITINEPNVLCAMGYDLGFFAPGVSQ-IGTGGYQAAHNMIKAHARAWHSYDSLFREKQKGMVSLSLFCIWPQPENPNSVLDQKAAERAINFQFDFF 254          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL21_ORYSJ (Beta-glucosidase 21 OS=Oryza sativa subsp. japonica GN=BGLU21 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 66/154 (42.86%), Postives = 83/154 (53.90%), Query Frame = -2
Query:  216 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH----------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 647
            GIQ +V +YH DLP  L +  GGW++ +IV  F  YAD CF  FGDRV +W T+ EP   A  GY  GI  P R  +          SS EPYL  HH +LAHA+A  +Y+ KYK  Q G IG+ +   W    +D  E+  A  R   F  GW
Sbjct:  138 GIQIHVVMYHMDLPQSLQDEYGGWISPKIVDDFTAYADVCFREFGDRVVHWTTVLEPNAMAQAGYDMGILPPNRCSYPFGSNCTAGNSSVEPYLFIHHSLLAHASAVRLYREKYKVAQKGIIGINIYSMWFYPFTDSAEEIGATERAKKFIYGW 291          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL31_ARATH (Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 67/158 (42.41%), Postives = 88/158 (55.70%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWY 653
            + GI+P+VT+YHWD+P  L +  G +L+  I+  F  YA  CF  FGD+V  W T NEP   +V+GY  G  A GR             S TEPYLV+HH +LAHAAA   +++  K  Q   IG+V+   W E  +S    DK A  R L F IGW+
Sbjct:  143 ENGIKPFVTIYHWDIPQALDDEYGSFLSPRIIDDFRNYARFCFQEFGDKVSMWTTFNEPYVYSVSGYDAGNKAMGRCSKWVNSLCIAGDSGTEPYLVSHHLLLAHAAAVEEFRKCDKISQDSKIGIVLSPYWFEPYDSASNADKEAVERALAFNIGWH 300          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: MYR3_SINAL (Myrosinase MB3 OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.726e-28
Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ------------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEW----AEANSDKIEDKSAAARRLDFQIGWY 653
            +K I P+VTL+HWDLP  L +   G+L+++I++ F+ YAD CF  FG +VKNWITIN+       GY  G  APGR              +SSTEPY+VAH+Q+LAHAA   +Y+  Y   Q G IG V+   W     E++   IE   AA R   F  GWY
Sbjct:  150 EKNITPFVTLFHWDLPQTLQDEYEGFLDRQIIQDFKDYADLCFKEFGGKVKNWITINQLYTVPTRGYALGTDAPGRCSPKVDTKQRCYGGNSSTEPYIVAHNQLLAHAAIVDLYRTNYA-FQNGKIGPVMITRWFLPYDESDPACIE---AAERMNQFFHGWY 308          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.944e-27
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = -2
Query:  216 QKGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 653
            ++GI+ +VTLYH D P  L +   GWL+  ++  F  YAD CF  FGDRV++W T++EP   ++  Y +G F P R            +S+ EPY+VAH+ ILAHA+   +Y+ KY+  Q G +G+ +   W    S    D +A  R LDF +GW
Sbjct:  150 ERGIEIHVTLYHLDFPQILEDEYHGWLSPRVIDDFTAYADVCFREFGDRVRHWTTMDEPNVLSIAAYDSGAFPPCRCSPPFGANCTAGNSTVEPYVVAHNSILAHASVTRLYRDKYQATQEGFVGMNIYSFWNYPFSSSSADIAATQRALDFMVGW 305          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL20_ORYSJ (Beta-glucosidase 20 OS=Oryza sativa subsp. japonica GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.944e-27
Identity = 66/154 (42.86%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  216 GIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH----------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 647
            GIQ  V LYH DLP  L +  GGW+N +IV  F  YAD CF  FGDRV +W T+ EP   A   Y TGI  P    +          S+ EPYL  HH +LAHA+A  +Y+ KY+  Q G IG+ +   W    +D  ED  A  R   F  GW
Sbjct:  141 GIQIQVALYHSDLPQSLQDEYGGWINPKIVDDFTAYADVCFREFGDRVAHWTTVLEPNVMAQGCYDTGILPPNHCSYPFGNNCTGGNSTVEPYLFIHHNLLAHASAVRLYREKYQVAQKGIIGINMYSLWFYPLTDSAEDIGATERAKQFMYGW 294          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27
Identity = 64/160 (40.00%), Postives = 86/160 (53.75%), Query Frame = -2
Query:  213 QKGIQPYVTLYHWDLPLHLPESRGGWLNKE---IVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 653
            + GI+PYVT++HWD+P  L E  GG+L+K    IV+ +  +A  CF +FGD+VKNW+T NEP       Y TG+FAPGR            +S  EPY   H+ +LAHA A  +Y + YK +    IGL  D            DK A  R  D  +GW+
Sbjct:  185 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWF 343          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27
Identity = 65/179 (36.31%), Postives = 87/179 (48.60%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKY-----------------------KDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 650
            K +QP+ TL+H+D P  L +   G+L+  I+  ++ YA+ CF  FGDRVK+WIT NEP      GY +G  APGR             S  EPY   HHQ+LAHA    +Y+ KY                       K  Q G IG++++ EW    S       AA R LDF +GW+
Sbjct:  147 KEVQPFATLFHFDTPQALEDKYKGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWNFCSMGYASGTMAPGRCSSWEKGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQFTEEAIRQSPFIRDNNLNRRSAKALQKGRIGIILNSEWFVPFSQSKSSNDAARRVLDFMLGWF 325          
BLAST of CX043678 vs. ExPASy Swiss-Prot
Match: KLOTB_MOUSE (Beta-klotho OS=Mus musculus GN=Klb PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.387e-27
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = -2
Query:  213 KGIQPYVTLYHWDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEAN-SDKIEDKSAAARRLDFQIGWY 650
            + I+P VTLYHWDLPL L E  GGW N  ++  F  YA  CF +FGDRVK WITI+ P   A +G+ TG+ APG  + + T  Y V H+ I AH+  +  Y + ++  Q G + + +   W E N +D +ED       +   +GW+
Sbjct:  185 RNIEPIVTLYHWDLPLTLQEEYGGWKNATMIDLFNDYATYCFQTFGDRVKYWITIHNPYLVAWHGFGTGMHAPG-EKGNLTAVYTVGHNLIKAHSKVWHNYDKNFRPHQKGWLSITLGSHWIEPNRTDNMEDVINCQHSMSSVLGWF 330          

HSP 2 Score: 102.449 bits (254), Expect = 2.082e-21
Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = -2
Query:  213 GIQPYVTLYH-----WDLPLHLPESRGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDK-SAAARRLDFQIGWY 647
            G+ P VTLYH       LPL L  S GGWLN    K F+ YA+ CF   GD VK WITINEP + +             +  +S + Y  AH+ ++AHA  + +Y R+Y+  Q G + L + C+WAE  +  ++    AA R L F+I W+
Sbjct:  632 GVFPMVTLYHPTHSHLGLPLPLLSS-GGWLNMNTAKAFQDYAELCFRELGDLVKLWITINEPNRLS-----------DMYNRTSNDTYRAAHNLMIAHAQVWHLYDRQYRPVQHGAVSLSLHCDWAEPANPFVDSHWKAAERFLQFEIAWF 770          
The following BLAST results are available for this feature:
BLAST of CX043678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MYRO_BRANA2.296e-2844.17Myrosinase OS=Brassica napus PE=2 SV=1[more]
GBA3_CAVPO2.999e-2843.84Cytosolic beta-glucosidase OS=Cavia porcellus GN=G... [more]
BGL21_ORYSJ3.917e-2842.86Beta-glucosidase 21 OS=Oryza sativa subsp. japonic... [more]
BGL31_ARATH5.116e-2842.41Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGL... [more]
MYR3_SINAL8.726e-2843.56Myrosinase MB3 OS=Sinapis alba PE=1 SV=1[more]
BGL22_ORYSJ1.944e-2739.10Beta-glucosidase 22 OS=Oryza sativa subsp. japonic... [more]
BGL20_ORYSJ1.944e-2742.86Beta-glucosidase 20 OS=Oryza sativa subsp. japonic... [more]
BGLC_MAIZE5.656e-2740.00Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]
BGL10_ORYSJ5.656e-2736.31Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]
KLOTB_MOUSE7.387e-2740.14Beta-klotho OS=Mus musculus GN=Klb PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043678 ID=CX043678; Name=CX043678; organism=Citrus sinensis; type=EST; length=654bp
TTTTTTTTTTTTTTTTTAAAGGAAAACAAAACGGAGATGTGCCACCAGCT
CAAATATAAATATTTGCATTGTAAAAAAGAAGAGATGGAATGATTTGCAA
TTTAAAGAATCAGACTTGGCGAACTATAAGTTTTATTTTTGCACCAAATT
ATCCAAACAACACCATTAATTAACTAATTCAAGGAAATAACATTTACTGA
GTATTTCAAGCAGTACCATCCAATCTGGAAATCAAGGCGCCTCGCTGCTG
CAGATTTATCTTCAATTTTATCTGAATTAGCCTCAGCCCATTCACAATCT
ACCACCAACCCTATGTTTCCCCCTTGCTTATCCTTATACTTTCTTTGGTA
TACTGAAAATGCTGCAGCATGGGCCAAGATCTGGTGGTGAGCAACCAAAT
ATGGCTCTGTTGATGAATGCTGATGTCTTCCAGGAGCAAATATCCCAGTA
CAATACCCATTAACCGCAGTTTGTAGGGGCTCATTTATTGTAATCCAATT
CTTTACTCTATCGCCAAAACTTGCAAAGCAAGTATCTGCATAAATTTCAA
AATATTTTACTATTTCCTTATTTAACCACCCACCCCTTGACTCAGGAAGA
TGCAAAGGAAGATCCCAATGGTACAATGTTACATAAGGCTGAATACCCTT
TTGA
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