CX043677

Overview
NameCX043677
Unique NameCX043677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_THENE (Beta-glucosidase A (Fragment) OS=Thermotoga neapolitana GN=bglA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 433
            N IID LL+K I P++T+YHWDLP  L +  GGW N++I  +F  Y+   F +FGDRVK+WIT+NEP   A+ G+  G+ APG         +   H+ + AHA +  V++   KD   G IG+V +  + E  S++ ED  AA
Sbjct:  100 NRIIDTLLEKNITPFITIYHWDLPFSL-QLKGGWANRDIADWFAEYSRVLFENFGDRVKHWITLNEPWVVAIVGHLYGVHAPG--MKDIYVAFHTVHNLLRAHAKSVKVFRETVKD---GKIGIVFNNGYFEPASEREEDIRAA 237          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL19_ARATH (Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR-------------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR-LDFQIGWY 466
            +++ID LL+  I P VT++HWD P  L +  GG+L++ IV  F  YA+  F  +GD+VKNWIT NEP   + +GY  G  APGR                S  EPY+V+H+ ++ HA A   + RK +  +GG IG+     W E   + +E   A   R LDF IGW+
Sbjct:  136 HDLIDELLKNDITPLVTVFHWDTPADLEDEYGGFLSERIVPDFVEYANFTFHEYGDKVKNWITFNEPWVFSRSGYDVGKKAPGRCSPYVKEFGKLCQDGRSGFEPYVVSHNLLVGHAEAVDAF-RKCEKCKGGKIGIAHSPAWFE--PEDVEGGQATVNRVLDFVIGWH 301          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.623e-25
Identity = 67/170 (39.41%), Postives = 96/170 (56.47%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR-----HQH--------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEAN--SDKIEDKSAAARRLDFQIGWY 466
            +++ID LL  GI P VT++HWD P  L +  GG+L+  I+K F  YA+  F  +GD+VK+WIT NEP   +  GY  G  APGR      +H        S  E Y+V+H+ +LAHA A   + RK    +GG IG+     W EA+  SD+ E ++     +DF +GW+
Sbjct:  140 HDLIDELLANGITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDFTEYANFTFQEYGDKVKHWITFNEPWVFSRAGYDIGNKAPGRCSKYIKEHGEMCHDGRSGHEAYIVSHNMLLAHADAVDAF-RKCDKCKGGKIGIAHSPAWFEAHELSDE-EHETPVTGLIDFILGWH 307          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL09_ORYSJ (Putative beta-glucosidase 9 OS=Oryza sativa subsp. japonica GN=BGLU9 PE=5 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 346
            NN+I+ LL KG+Q +VTL+H+D P  L +   G+L+  I+  ++ YA+ CF  FGDRVK+WIT NEP       Y +G +APGR             S  EPY   HHQ+LAHA    +Y+ KY+
Sbjct:  141 NNLINELLLKGVQSFVTLFHYDTPQALEDKYNGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWIFCSKAYASGTYAPGRCSPWEMGKCSVGDSGREPYTACHHQLLAHAETVRLYREKYQ 265          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.791e-24
Identity = 63/168 (37.50%), Postives = 90/168 (53.57%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE---ANSDKIEDKSAAARRLDFQIGWY 466
            N++I+ L+  G+ P VTL+ WD+P  L +  GG+L+  I++ F  +A   F  +GDRVK+W+TINEP + +  GY TG  APGR             S  E Y V+H+ +LAHA A   + RK     GG IG+V    W E     S     +    R +DF +GW+
Sbjct:  138 NDLINELIANGVTPLVTLFQWDVPQALEDEYGGFLSDRILEDFRDFAQFAFNKYGDRVKHWVTINEPYEFSRGGYETGEKAPGRCSKYVNEKCVAGKSGHEVYTVSHNLLLAHAEAVEEF-RKCGKCTGGKIGIVQSPMWFEPYDKKSTSSPSEEIVKRAMDFTLGWH 304          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL24_ARATH (Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGLU24 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.791e-24
Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ---------------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAA-RRLDFQIGWY 466
            +++ID L + GI P+VT++HWD P  L    GG+L+  IVK F  YA+  F  +G +VK+WIT NEP   A  GY  G  APGR                  S  E YLV+H+ + AHA A   +++  K K GG IG+     W E +  K E   A   R LDF +GW+
Sbjct:  142 HDLIDELKRNGIIPFVTVFHWDTPQTLENEYGGFLSAHIVKDFREYAEFVFKEYGGKVKHWITFNEPWVFAHAGYDVGKKAPGRCSPYAKDETVKGDCLGGRSGYEAYLVSHNLLNAHAEAVEAFRQCEKCK-GGKIGIAHSPAWFEPHDFKDEQSGATIDRALDFIMGWH 311          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.173e-22
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 2
Query:    5 NIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            +++D +   G+ P +TLYHWDLP  + E  GGW  +E +++F+ YA      FG+R+  W TINEP   ++ GY TG  APG    +  E +  AHH ++ H  A ++++ K      G IG+ ++ E  +A S++ ED +AA RR  F   W+
Sbjct:  104 HLLDEIELAGLIPMLTLYHWDLPQWI-EDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG--HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWF 251          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21
Identity = 64/168 (38.10%), Postives = 88/168 (52.38%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR--------HQH-----SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            +++ID LL+  I P VT++HWD P  L +  GG+L+  IV+ F  YA+  F  +G +VK+WIT NEP   +  GY  G  APGR         QH     S  E Y V+H+ +L+HA A   + R  K   GG IG+     W E   D      +  R LDF +GW+
Sbjct:  142 HDLIDELLKNNIIPLVTVFHWDTPQDLEDEYGGFLSGRIVQDFTEYANFTFHEYGHKVKHWITFNEPWVFSRAGYDNGKKAPGRCSPYIPGYGQHCQDGRSGYEAYQVSHNLLLSHAYAVDAF-RNCKQCAGGKIGIAHSPAWFEP-QDLEHVGGSIERVLDFILGWH 307          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: GMUD_BACSU (6-phospho-beta-glucosidase gmuD OS=Bacillus subtilis GN=gmuD PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVD 382
            NN+ID L+  GI+P+V L+H+D+P+ L + +GGW+N+E V  +E YA TCF  FG RVK W T NEP+     GY      P +      E   V  H +L+ A A   Y+     KQ G IG++++
Sbjct:  106 NNVIDELIANGIEPFVNLFHFDMPMAL-QKIGGWVNRETVDAYENYARTCFRLFGGRVKKWFTHNEPIVPVEGGYLYDFHYPNKVDFK--EAVQVGFHTMLSSARAIQAYREM---KQDGKIGIILN 226          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL02_ARATH (Putative beta-glucosidase 2 OS=Arabidopsis thaliana GN=BGLU2 PE=5 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20
Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 2
Query:  125 YFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH-----SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL-VVDCEWAEANSDKIEDKSAAARRLDFQIGW 463
            YF  YAD CF  FG+ VK W TINE     + GY  G   PGR  +     SSTE Y+V H+ +LAHA+   +YQ+KYKDKQGG++G  +   E+    S   +D+ A  R  DF  GW
Sbjct:   26 YFTAYADVCFREFGNHVKFWTTINEANVFTIGGYNDGTSPPGRCSNCSSGNSSTETYIVGHNLLLAHASVSRLYQQKYKDKQGGSVGFSLYAFEFIPQTSSSKDDEIAIQRAKDFFYGW 144          
The following BLAST results are available for this feature:
BLAST of CX043677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
BGLA_THENE3.297e-2541.67Beta-glucosidase A (Fragment) OS=Thermotoga neapol... [more]
BGL19_ARATH3.297e-2539.05Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGL... [more]
BGL20_ARATH5.623e-2539.41Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]
BGL09_ORYSJ7.344e-2543.20Putative beta-glucosidase 9 OS=Oryza sativa subsp.... [more]
BGL25_ARATH2.791e-2437.50Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL24_ARATH2.791e-2439.18Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGL... [more]
BGLB_PAEPO1.173e-2236.36Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]
BGL18_ARATH1.693e-2138.10Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]
GMUD_BACSU1.097e-2040.166-phospho-beta-glucosidase gmuD OS=Bacillus subtil... [more]
BGL02_ARATH1.433e-2044.54Putative beta-glucosidase 2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043677 ID=CX043677; Name=CX043677; organism=Citrus sinensis; type=EST; length=677bp
CAACAATATCATTGATGCTCTTCTTCAAAAGGGTATTCAGCCTTATGTAA
CATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGGTGGG
TGGTTAAATAAGGAAATAGTAAAATATTTTGAAATTTATGCAGATACTTG
CTTTGCAAGTTTTGGCGATAGAGTAAAGAATTGGATTACAATAAATGAGC
CCCTACAAACTGCGGTTAATGGGTATTGTACTGGGATATTTGCTCCTGGA
AGACATCAGCATTCATCAACAGAGCCATATTTGGTTGCTCACCACCAGAT
CTTGGCCCATGCTGCAGCATTTTCAGTATACCAAAGAAAGTATAAGGATA
AGCAAGGGGGAAACATAGGGTTGGTGGTAGATTGTGAATGGGCTGAGGCT
AATTCAGATAAAATTGAAGATAAATCTGCAGCAGCGAGGCGCCTTGATTT
CCAGATTGGATGGTACTGCTTGAAATACTCAGTAAATGTTATTTCCTTGA
ATTAGTTAATTAATGGTGTTGTTTGGATAATTTGGTGCAAAAATAAAACT
TATAGTTCGCCAAGTCTGATTCTTTAAATTGCAAATCATTCCATCTCTTC
TTTTTTACAATGCAAATATTTATATTTGAGCTGGTGGCACATCTCCGTTT
TGTTTTCCTTTAAAAAAAAAAAAAAAA
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