CX043677

Overview
NameCX043677
Unique NameCX043677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.872e-20
Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            + ++D L   GI+P+ TLYHWDLP  L ++ GGW N+  ++ F  +A+T F  F  ++++W+T NEP   A      G+ APG     +     V HH ++AH  +     R++++    G IG+  +  WA   S   EDK+A AR +     W+
Sbjct:  102 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWF 250          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_CLOAB (6-phospho-beta-galactosidase OS=Clostridium acetobutylicum GN=lacG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQI 457
            +++ID  ++  ++P+VTL+H+D PL L +  G WLN+  + YF  +A  CF + GDRVK WIT NE    A NGY  G F P   ++   +     H+ ++AHA    +Y+    D   G IG+V   E     +D  EDK AA   LD+ I
Sbjct:   96 SDLIDECIKNNVEPFVTLHHFDTPLTLFKD-GDWLNRNNIDYFVRFAKVCFEALGDRVKKWITFNEAWAVAQNGYIIGNFPPS-IKYDIPKAAQSMHNMMVAHAKVVELYKSMNLD---GEIGIVHTLEGKYPITDSKEDKEAA--YLDYMI 240          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19
Identity = 55/154 (35.71%), Postives = 82/154 (53.25%), Query Frame = 2
Query:    8 IIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG-RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            + + LL+ GI P +TLYHWDLP  L +  GGW N++   YF  Y++  F + GD V  W T NEP   ++ G+  GI APG +   +S E   V+H+ +L+H  A  +++    D Q   IG+ ++  +    S+K ED  AA         WY
Sbjct:  104 LTNLLLENGIMPAITLYHWDLPQKLQDK-GGWKNRDTTDYFTEYSEVIFKNLGDIVPIWFTHNEPGVVSLLGHFLGIHAPGIKDLRTSLE---VSHNLLLSHGKAVKLFREMNIDAQ---IGIALNLSYHYPASEKAEDIEAAELSFSLAGRWY 250          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_BACCI (Beta-glucosidase OS=Bacillus circulans GN=bglA PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.903e-18
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            + ++D LL  GI+P+ TLYHWDLP  L +  GGW ++  +  F  YA+  F   G ++K WIT NEP   A      G+ APG           V+HH ++AH  A ++++        G IG+  +  WA       ED  A  R   +   WY
Sbjct:  102 HRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAID--VSHHLLVAHGRAVTLFREL---GISGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWY 250          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_LACCA (6-phospho-beta-galactosidase OS=Lactobacillus casei GN=lacG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.696e-18
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   35 IQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 433
            I+P+VTL+H+D P  LHE+ G WL++E++  F  YA  CF  F + VK WITINEP   AV  Y TG F P        + +   H+Q++AHA   ++Y+     + GG IG+V   +     SD   D  AA
Sbjct:  108 IEPFVTLHHFDTPERLHEA-GDWLSQEMLDDFVAYAKFCFEEFSE-VKYWITINEPTSMAVQQYTTGTFPPAESGRFD-KTFQAEHNQMVAHARIVNLYKSM---QLGGQIGIVHALQTVYPYSDSAVDHHAA 234          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_LACRH (6-phospho-beta-galactosidase OS=Lactobacillus rhamnosus GN=lacG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 2
Query:   41 PYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 433
            P+VTL+H+D P  LH ++G WL++E+++ F  YA  CF  F + +K+WITINEP   AV  Y +G F P    H   + +   H+QI+AHA   ++Y+    D   G IG+V   +     SD  ED+ AA
Sbjct:  110 PFVTLHHFDTPERLH-AIGDWLSQEMLEDFVEYARFCFEEFPE-IKHWITINEPTSMAVQQYTSGTFPPAETGHFD-KTFQAEHNQIVAHARIVNLYKSMGLD---GEIGIVHALQTPYPYSDSSEDQHAA 234          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_LACCB (6-phospho-beta-galactosidase OS=Lactobacillus casei (strain BL23) GN=lacG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   35 IQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 433
            I+P+VTL+H+D P  LHE+ G WL++E++  F  YA  CF  F + VK WITINEP   AV  Y +G F P        + +   H+Q++AHA   ++Y+     + GG IG+V   +     SD   D  AA
Sbjct:  108 IEPFVTLHHFDTPERLHEA-GDWLSQEMLDDFVAYAKFCFEEFSE-VKYWITINEPTSMAVQQYTSGTFPPAESGRFD-KTFQAEHNQMVAHARIVNLYKSM---QLGGQIGIVHALQTVYPYSDSAVDHHAA 234          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLS_CALSA (Beta-glucosidase A OS=Caldocellum saccharolyticum GN=bglA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16
Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 250
            + +I+ L++ GI+P VTLYHWDLP  L + +GGW N EIV Y+  YA      + D+VK WIT NEP   A  GY  GI APG
Sbjct:  101 DRLINKLVENGIEPVVTLYHWDLPQKLQD-IGGWANPEIVNYYFDYAMLVINRYKDKVKKWITFNEPYCIAFLGYFHGIHAPG 182          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLC_BACSU (Aryl-phospho-beta-D-glucosidase bglC OS=Bacillus subtilis GN=bglC PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15
Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYCLKY 478
            +++ID LL   I+P +TLYHWDLP  L +  GG+ ++ I++ F  Y  T +  FGDRVK W+T+NE      +G+ T +  PG         Y   H   LA+A A   + R+Y  +  G IG       A   S   ED  A     +F   W+   Y
Sbjct:  105 DSLIDELLSHHIEPVLTLYHWDLPQALMDEYGGFESRNIIEDFNHYCITLYKRFGDRVKYWVTLNEQNYNFNHGFITAMHPPGVKDRKRF--YEANHIAFLANAKAIESF-REYVPE--GKIGPSFAYSPAYPLSSHPEDILAFENAEEFTNNWWLDMY 258          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_ECOLI (6-phospho-beta-glucosidase bglA OS=Escherichia coli (strain K12) GN=bglA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINE-----PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR----LDFQIGWYCLKYSVN 487
            +++ D LL+  I+P +TL H+++PLHL +  G W N+++V +F  +A+  F  +  +VK W+T NE       +  + GYC        H++     Y V HHQ +A A A    +R   + + G +  +V       N D +     + R      D Q+  Y   Y +N
Sbjct:  115 DDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLN 285          
The following BLAST results are available for this feature:
BLAST of CX043677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
BGLA_PAEPO1.872e-2033.33Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
LACG_CLOAB3.193e-2037.506-phospho-beta-galactosidase OS=Clostridium acetob... [more]
BGLA_CLOTH2.703e-1935.71Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
BGLA_BACCI3.903e-1833.55Beta-glucosidase OS=Bacillus circulans GN=bglA PE=... [more]
LACG_LACCA8.696e-1839.856-phospho-beta-galactosidase OS=Lactobacillus case... [more]
LACG_LACRH1.483e-1739.696-phospho-beta-galactosidase OS=Lactobacillus rham... [more]
LACG_LACCB2.530e-1739.106-phospho-beta-galactosidase OS=Lactobacillus case... [more]
BGLS_CALSA1.256e-1650.60Beta-glucosidase A OS=Caldocellum saccharolyticum ... [more]
BGLC_BACSU4.039e-1533.96Aryl-phospho-beta-D-glucosidase bglC OS=Bacillus s... [more]
BGLA_ECOLI8.999e-1528.076-phospho-beta-glucosidase bglA OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043677 ID=CX043677; Name=CX043677; organism=Citrus sinensis; type=EST; length=677bp
CAACAATATCATTGATGCTCTTCTTCAAAAGGGTATTCAGCCTTATGTAA
CATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGGTGGG
TGGTTAAATAAGGAAATAGTAAAATATTTTGAAATTTATGCAGATACTTG
CTTTGCAAGTTTTGGCGATAGAGTAAAGAATTGGATTACAATAAATGAGC
CCCTACAAACTGCGGTTAATGGGTATTGTACTGGGATATTTGCTCCTGGA
AGACATCAGCATTCATCAACAGAGCCATATTTGGTTGCTCACCACCAGAT
CTTGGCCCATGCTGCAGCATTTTCAGTATACCAAAGAAAGTATAAGGATA
AGCAAGGGGGAAACATAGGGTTGGTGGTAGATTGTGAATGGGCTGAGGCT
AATTCAGATAAAATTGAAGATAAATCTGCAGCAGCGAGGCGCCTTGATTT
CCAGATTGGATGGTACTGCTTGAAATACTCAGTAAATGTTATTTCCTTGA
ATTAGTTAATTAATGGTGTTGTTTGGATAATTTGGTGCAAAAATAAAACT
TATAGTTCGCCAAGTCTGATTCTTTAAATTGCAAATCATTCCATCTCTTC
TTTTTTACAATGCAAATATTTATATTTGAGCTGGTGGCACATCTCCGTTT
TGTTTTCCTTTAAAAAAAAAAAAAAAA
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