CX043677

Overview
NameCX043677
Unique NameCX043677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG1_STRR6 (6-phospho-beta-galactosidase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lacG1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAA 319
            + +  + L+  + P+V+L+H+D P  + E+ G WLN+E +  F  YA  CF  F + VK+W TINE +  A   Y  G F P  H   S E     H+ +LAHA A
Sbjct:  101 HRVFQSCLKHNVIPFVSLHHFDSPQKMLET-GDWLNRENIDRFIRYARFCFQEFTE-VKHWFTINELMSLAAGQYIGGQFPPNHHFQLS-EAIQANHNMLLAHALA 203          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG1_STRPN (6-phospho-beta-galactosidase 1 OS=Streptococcus pneumoniae GN=lacG1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAA 319
            + +  + L+  + P+V+L+H+D P  + E+ G WLN+E +  F  YA  CF  F + VK+W TINE +  A   Y  G F P  H   S E     H+ +LAHA A
Sbjct:  101 HRVFQSCLKHNVIPFVSLHHFDSPQKMLET-GDWLNRENIDRFIRYARFCFQEFTE-VKHWFTINELMSLAAGQYIGGQFPPNHHFQLS-EAIQANHNMLLAHALA 203          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STRU0 (6-phospho-beta-galactosidase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=lacG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 45/139 (32.37%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDKI 415
            +N+     ++G++P+VTL+H+D P  LH S G +LN++ + +F  YA  CF  F + V  W T NE        Y  G F PG  Q+   + +   H+ +++HA A  +Y+ K YK + G    L     +  AN D +
Sbjct:   97 HNLFAECHKRGVEPFVTLHHFDTPEALH-SNGDFLNRDNIDHFVAYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IQYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPANPDDV 232          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGLA_ENTAG (Beta-glucosidase A OS=Enterobacter agglomerans GN=bglA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 2
Query:   32 GIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT------------GIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLD 448
            GI+P VTLYHWD+P  L  + GGW N+E V++F+ YA+  FA+F D+V  ++ INEP                       I   G +  +S + Y   +H +LA AAA   ++ K YK    G +G+ +         +  ++  A AR +D
Sbjct:  123 GIKPLVTLYHWDMPESL-SAAGGWENRESVEWFQRYAEVIFANFSDQVDQFVLINEPTVEVATKIMAEKRLKGEELTLPPIVPAGSYLETSLKSY---NHILLASAAAAESFKVKGYK----GRLGIALPFFPVLTTENASDEDKADARLVD 266          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STRZJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain JJA) GN=lacG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH S G +LN+E +++F  YA  CF  F + V  W T NE        Y  G F PG  Q+   + +   H+ +++HA A  +Y+ K YK    G IG+V
Sbjct:   97 HNLFAECHKRHVEPFVTLHHFDTPEALH-SNGDFLNRENIEHFVDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IQYDLAKVFQSHHNMMVSHACAVKLYKEKGYK----GEIGVV 215          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STRSV (6-phospho-beta-galactosidase OS=Streptococcus sanguinis (strain SK36) GN=lacG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH S G +LN+E +++F  YA  CF  F + V+ W T NE        Y  G F PG  Q+   + +   H+ +++HA A  +Y+ K YK    G IG+V
Sbjct:   97 HNLFAECHKRHVEPFVTLHHFDTPEALH-SNGDFLNRENIEHFVNYAAFCFEEFPE-VRYWTTFNEIGPIGDGQYLVGKFPPG-IQYDLAKVFQSHHNMMVSHARAVKLYKDKGYK----GEIGVV 215          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STRPJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH S G +LN+E +++F  YA  CF  F + V  W T NE        Y  G F PG  Q+   + +   H+ +++HA A  +Y+ K YK    G IG+V
Sbjct:   97 HNLFAECHKRHVEPFVTLHHFDTPEALH-SNGDFLNRENIEHFVDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IQYDLAKVFQSHHNMMVSHARAVKLYKEKGYK----GEIGVV 215          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG2_STRPN (6-phospho-beta-galactosidase 2 OS=Streptococcus pneumoniae GN=lacG2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH S G +LN+E +++F  YA  CF  F + V  W T NE        Y  G F PG  Q+   + +   H+ +++HA A  +Y+ K YK    G IG+V
Sbjct:   97 HNLFAECHKRHVEPFVTLHHFDTPEALH-SNGDFLNRENIEHFVDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IQYDLAKVFQSHHNMMVSHARAVKLYKEKGYK----GEIGVV 215          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STAES (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=lacG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQ-RKYKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH+  G +LN++ + YF  YA+ CF  F + VK W T NE        Y  G F PG  ++   + +   H+ ++AHA A  +++   YK    G IG+V
Sbjct:   97 HNLFKECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEFCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDFEKVFQSHHNMMVAHARAVKLFKDENYK----GEIGVV 215          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LACG_STAEQ (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=lacG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQ-RKYKDKQGGNIGLV 376
            +N+     ++ ++P+VTL+H+D P  LH+  G +LN++ + YF  YA+ CF  F + VK W T NE        Y  G F PG  ++   + +   H+ ++AHA A  +++   YK    G IG+V
Sbjct:   97 HNLFKECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEFCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDFEKVFQSHHNMMVAHARAVKLFKDENYK----GEIGVV 215          
The following BLAST results are available for this feature:
BLAST of CX043677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
LACG1_STRR67.130e-1237.746-phospho-beta-galactosidase 1 OS=Streptococcus pn... [more]
LACG1_STRPN7.130e-1237.746-phospho-beta-galactosidase 1 OS=Streptococcus pn... [more]
LACG_STRU09.312e-1232.376-phospho-beta-galactosidase OS=Streptococcus uber... [more]
BGLA_ENTAG9.312e-1232.24Beta-glucosidase A OS=Enterobacter agglomerans GN=... [more]
LACG_STRZJ2.709e-1134.926-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG_STRSV3.539e-1134.926-phospho-beta-galactosidase OS=Streptococcus sang... [more]
LACG_STRPJ3.539e-1134.926-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG2_STRPN3.539e-1134.926-phospho-beta-galactosidase 2 OS=Streptococcus pn... [more]
LACG_STAES6.036e-1133.336-phospho-beta-galactosidase OS=Staphylococcus epi... [more]
LACG_STAEQ6.036e-1133.336-phospho-beta-galactosidase OS=Staphylococcus epi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043677 ID=CX043677; Name=CX043677; organism=Citrus sinensis; type=EST; length=677bp
CAACAATATCATTGATGCTCTTCTTCAAAAGGGTATTCAGCCTTATGTAA
CATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGGTGGG
TGGTTAAATAAGGAAATAGTAAAATATTTTGAAATTTATGCAGATACTTG
CTTTGCAAGTTTTGGCGATAGAGTAAAGAATTGGATTACAATAAATGAGC
CCCTACAAACTGCGGTTAATGGGTATTGTACTGGGATATTTGCTCCTGGA
AGACATCAGCATTCATCAACAGAGCCATATTTGGTTGCTCACCACCAGAT
CTTGGCCCATGCTGCAGCATTTTCAGTATACCAAAGAAAGTATAAGGATA
AGCAAGGGGGAAACATAGGGTTGGTGGTAGATTGTGAATGGGCTGAGGCT
AATTCAGATAAAATTGAAGATAAATCTGCAGCAGCGAGGCGCCTTGATTT
CCAGATTGGATGGTACTGCTTGAAATACTCAGTAAATGTTATTTCCTTGA
ATTAGTTAATTAATGGTGTTGTTTGGATAATTTGGTGCAAAAATAAAACT
TATAGTTCGCCAAGTCTGATTCTTTAAATTGCAAATCATTCCATCTCTTC
TTTTTTACAATGCAAATATTTATATTTGAGCTGGTGGCACATCTCCGTTT
TGTTTTCCTTTAAAAAAAAAAAAAAAA
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