CX043677

Overview
NameCX043677
Unique NameCX043677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33
Identity = 78/187 (41.71%), Postives = 105/187 (56.15%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYK-----------------------DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 463
            NN+ID L+  GIQP+VTL+H+DLP  L +  GGWL++EIV+ F  YADTCF  FGDRV +W TINE    A+ GY  GI  P R            +SS EPY+  H+ +LAHA+A  +Y+++YK                        KQ G++G+ V    A   ++ ++DK A AR  DF IGW
Sbjct:  125 NNLIDELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPARCSPPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYKVLLSASLPSSICIAFCYVLFITQYKQHGSVGISVYTYGAVPLTNSVKDKQATARVNDFYIGW 311          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32
Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 2
Query:   11 IDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR-LDFQIGWY 466
            IDALL  GI P VT+YHWDLP  L + +GGW N+ IV+ F+ YAD  F   GDRVK WIT+NEP   A  GY TG+ APG      T PY+  H+ I AHA A+ +Y   Y+ +QGG I + +  +W E       +   AAR  + F  GW+
Sbjct: 1478 IDALLAAGITPQVTIYHWDLPQALQD-VGGWENETIVQRFKEYADVLFQRLGDRVKFWITLNEPFVIAAQGYGTGVSAPGISFRPGTAPYIAGHNLIKAHAEAWHLYNDVYRARQGGTISITISSDWGEPRDPTNREHVEAARSYVQFMGGWF 1629          

HSP 2 Score: 136.732 bits (343), Expect = 1.058e-31
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIE-DKSAAARRLDFQIGWY 466
            N +ID+L+   I P VTL+HWDLP  L + +GGW N  +++ F+ YAD CF +FGDRVK W+T NEP    V GY +GIF P   Q     PY V+H  I AHA  +  Y  KY+ +Q G I L ++  WAE     ++ D  AA R L F +GW+
Sbjct: 1003 NRLIDSLVDNNIFPMVTLFHWDLPQALQD-IGGWENPSLIELFDSYADYCFKTFGDRVKFWMTFNEPWCHVVLGYSSGIFPPS-VQEPGWLPYKVSHIVIKAHARVYHTYDEKYRSEQKGVISLSLNTHWAEPKDPGLQRDVEAADRMLQFTMGWF 1156          

HSP 3 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKI-EDKSAAARRLDFQIGWY 466
            N +ID LL   I+P  TL+HWDLP  L E  GGW N+ +V+ F  YA  CF++FGDRVK W+T +EP   +  GY TG  AP          + VAH  + AHA  + +Y   ++ +Q G +G+V++ + AE    K  +D +AA R L F +GW+
Sbjct:  480 NKLIDRLLDSHIEPMATLFHWDLPQALQEQ-GGWQNESVVEAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHAPAISDPGMAS-FKVAHLILKAHARTWHLYDLHHRLQQQGRVGIVLNSDLAEPLDRKSPQDLAAAERFLHFMLGWF 633          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LPH_HUMAN (Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32
Identity = 71/154 (46.10%), Postives = 91/154 (59.09%), Query Frame = 2
Query:    8 IIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKSAAARRLDFQIGWY 466
            +ID LL   IQP VT+YHWDLP  L + +GGW N+ IV+ F+ YAD  F   GD+VK WIT+NEP   A  GY  G  APG      T PY+V H+ I AHA A+ +Y   Y+  QGG I + +  +WAE  +    ED  AA R + F  GW+
Sbjct: 1476 LIDTLLAASIQPQVTIYHWDLPQTLQD-VGGWENETIVQRFKEYADVLFQRLGDKVKFWITLNEPFVIAYQGYGYGTAAPGVSNRPGTAPYIVGHNLIKAHAEAWHLYNDVYRASQGGVISITISSDWAEPRDPSNQEDVEAARRYVQFMGGWF 1628          

HSP 2 Score: 134.806 bits (338), Expect = 4.021e-31
Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKI-EDKSAAARRLDFQIGWY 466
            N +I+ L+   I P VTL+HWDLP  L + +GGW N  ++  F+ YAD CF +FGDRVK W+T NEP+  A  GY +G F PG  +     PY +AH  I AHA  +  Y  KY+ +Q G I L +   WAE  S  +  D  AA R L F +GW+
Sbjct: 1001 NRLINGLVASNIFPMVTLFHWDLPQALQD-IGGWENPALIDLFDSYADFCFQTFGDRVKFWMTFNEPMYLAWLGYGSGEFPPG-VKDPGWAPYRIAHAVIKAHARVYHTYDEKYRQEQKGVISLSLSTHWAEPKSPGVPRDVEAADRMLQFSLGWF 1154          

HSP 3 Score: 123.25 bits (308), Expect = 1.211e-27
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANS-DKIEDKSAAARRLDFQIGWY 466
            N +ID L   GI+P  TL+HWDLP  L +  GGW N+ +V  F  YA  CF++FGDRVK W+T +EP   +  GY TG   PG         + VAH  + AHA  +  Y   ++ +Q G++G+V++ +WAE  S ++ ED  A+ R L F +GW+
Sbjct:  478 NKLIDRLQDAGIEPMATLFHWDLPQALQDH-GGWQNESVVDAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHPPG-ISDPGVASFKVAHLVLKAHARTWHHYNSHHRPQQQGHVGIVLNSDWAEPLSPERPEDLRASERFLHFMLGWF 631          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL04_ARATH (Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU4 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 2
Query:    5 NIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR---------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N+I  L+  GI+P+VTLYH+D P  L +  GGWLN  ++K F  YAD CF  FG+ VK W TINE    ++ GY  G   PGR           +SS EPY+V H+ +LAHA+    Y++KYKDKQGG+IG  +        +   +D +A  R  DF +GW+
Sbjct:  122 NLIQELVSHGIEPHVTLYHYDHPQSLEDEYGGWLNHRMIKDFTTYADVCFREFGNHVKLWTTINEANIFSIGGYNDGDTPPGRCSKPSKNCSSGNSSIEPYIVGHNLLLAHASVSRRYKQKYKDKQGGSIGFSLFILGLIPTTSSKDDATATQRAQDFYVGWF 284          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: LCTL_HUMAN (Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKSAAARRLDFQIGWY 466
            +++IDALL   I P VTL+HWDLP  L    GGW N  +  YF  YA+ CF +FGDRVK+WIT ++P   A  GY TG  APG  +   T  Y  AHH I AHA A+  Y   ++ KQ G +G+ ++C+W E  +    +D  AA R L F +GW+
Sbjct:  136 SDLIDALLSSNITPIVTLHHWDLPQLLQVKYGGWQNVSMANYFRDYANLCFEAFGDRVKHWITFSDPRAMAEKGYETGHHAPGL-KLRGTGLYKAAHHIIKAHAKAWHSYNTTWRSKQQGLVGISLNCDWGEPVDISNPKDLEAAERYLQFCLGWF 290          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.637e-32
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 2
Query:    5 NIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR---------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 463
            N I  L+  GI+P+VTL+H+D P +L +  GGW+N+ I++ F  YA+ CF  FG  VK W TINE     + GY  GI  PGR           +SSTEPY+V H+ +LAHA+A  +Y++KYKD QGG++G  +       ++   +D  A  R  DF  GW
Sbjct:  120 NFIQELVSHGIEPHVTLFHYDHPQYLEDEYGGWINRRIIQDFTAYANVCFREFGHHVKFWTTINEANIFTIGGYNDGITPPGRCSSPGRNCSSGNSSTEPYIVGHNLLLAHASASRLYKQKYKDMQGGSVGFSLFSLGFTPSTSSKDDDIAVQRAKDFYFGW 281          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL02_ORYSJ (Beta-glucosidase 2 OS=Oryza sativa subsp. japonica GN=BGLU2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.203e-32
Identity = 69/165 (41.82%), Postives = 94/165 (56.97%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ-----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 463
            NN+ID L ++GIQP++ L H DLP  L +   GWL+  IV  F  YAD CF  FGDRV +W T+ EP   A+ GY TG+ +PG              +S+ EPY+ AH+ IL HAA   +Y+ KY+  Q G +G+ +   W+   ++ I D  AA R  DF  GW
Sbjct:  125 NNVIDELAKRGIQPHIMLCHLDLPQALEDEYDGWLSPRIVDDFTAYADVCFREFGDRVLHWTTLAEPNIAALGGYDTGVLSPGHCSDPFGLTECTVGNSTVEPYITAHNMILTHAAVVRLYREKYQALQKGIVGINMFSLWSYPLTNSIADLQAAQRYKDFSYGW 289          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31
Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N++I+ ++ +G++P+VT++H+D P  L +    +L++ IVK F  YAD CF  FGDRVK+W T NEP+     GY +G  APGR             S  EPY+  H+ +LAHA A  +Y++KY+  Q G IG+     W    SD   DK A  R LDF  GW+
Sbjct:  127 NSLINEVISRGLKPFVTIFHFDTPQALEDKYRSFLSENIVKDFVDYADVCFREFGDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCSPYVSKKCAPGDSGNEPYVAGHNLLLAHAEAVRLYRQKYQATQKGQIGITQVSHWFVPYSDAAADKHAVRRSLDFMYGWF 291          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL05_ARATH (Putative beta-glucosidase 5 OS=Arabidopsis thaliana GN=BGLU5 PE=5 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31
Identity = 68/162 (41.98%), Postives = 94/162 (58.02%), Query Frame = 2
Query:    5 NIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ---------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGW 463
            N+I  L+  GI+P+VTLYH+D P +L +  GGW+N  ++K F  Y D CF  FG+ VK W T+NE     + GY  G   PGR           +SSTE Y+V H+ +LAHA+A  +Y++KYKDKQGG+IG  +       ++   +D  A  R  DF  GW
Sbjct:  122 NLISELITHGIEPHVTLYHYDHPQYLEDEYGGWVNNMMIKDFTAYVDVCFREFGNYVKFWTTVNEANVFTIGGYNDGDTPPGRCSLPGKNCLLGNSSTETYIVGHNLLLAHASASRLYKQKYKDKQGGSIGFGLYLMGLTPSTSSKDDAIATQRAKDFYFGW 283          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: MYR3_SINAL (Myrosinase MB3 OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.382e-31
Identity = 77/171 (45.03%), Postives = 101/171 (59.06%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ------------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEW----AEANSDKIEDKSAAARRLDFQIGWY 466
            +N+IDALL+K I P+VTL+HWDLP  L +   G+L+++I++ F+ YAD CF  FG +VKNWITIN+       GY  G  APGR              +SSTEPY+VAH+Q+LAHAA   +Y+  Y   Q G IG V+   W     E++   IE   AA R   F  GWY
Sbjct:  142 HNLIDALLEKNITPFVTLFHWDLPQTLQDEYEGFLDRQIIQDFKDYADLCFKEFGGKVKNWITINQLYTVPTRGYALGTDAPGRCSPKVDTKQRCYGGNSSTEPYIVAHNQLLAHAAIVDLYRTNYA-FQNGKIGPVMITRWFLPYDESDPACIE---AAERMNQFFHGWY 308          
The following BLAST results are available for this feature:
BLAST of CX043677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
BGL11_ARATH7.327e-3341.71Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGL... [more]
LPH_RAT1.250e-3245.75Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]
LPH_HUMAN1.250e-3246.10Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT... [more]
BGL04_ARATH1.250e-3242.94Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU... [more]
LCTL_HUMAN2.784e-3244.87Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 ... [more]
BGL03_ARATH3.637e-3241.98Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL02_ORYSJ6.203e-3241.82Beta-glucosidase 2 OS=Oryza sativa subsp. japonica... [more]
BGL27_ORYSJ1.058e-3140.61Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]
BGL05_ARATH1.058e-3141.98Putative beta-glucosidase 5 OS=Arabidopsis thalian... [more]
MYR3_SINAL1.382e-3145.03Myrosinase MB3 OS=Sinapis alba PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043677 ID=CX043677; Name=CX043677; organism=Citrus sinensis; type=EST; length=677bp
CAACAATATCATTGATGCTCTTCTTCAAAAGGGTATTCAGCCTTATGTAA
CATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGGTGGG
TGGTTAAATAAGGAAATAGTAAAATATTTTGAAATTTATGCAGATACTTG
CTTTGCAAGTTTTGGCGATAGAGTAAAGAATTGGATTACAATAAATGAGC
CCCTACAAACTGCGGTTAATGGGTATTGTACTGGGATATTTGCTCCTGGA
AGACATCAGCATTCATCAACAGAGCCATATTTGGTTGCTCACCACCAGAT
CTTGGCCCATGCTGCAGCATTTTCAGTATACCAAAGAAAGTATAAGGATA
AGCAAGGGGGAAACATAGGGTTGGTGGTAGATTGTGAATGGGCTGAGGCT
AATTCAGATAAAATTGAAGATAAATCTGCAGCAGCGAGGCGCCTTGATTT
CCAGATTGGATGGTACTGCTTGAAATACTCAGTAAATGTTATTTCCTTGA
ATTAGTTAATTAATGGTGTTGTTTGGATAATTTGGTGCAAAAATAAAACT
TATAGTTCGCCAAGTCTGATTCTTTAAATTGCAAATCATTCCATCTCTTC
TTTTTTACAATGCAAATATTTATATTTGAGCTGGTGGCACATCTCCGTTT
TGTTTTCCTTTAAAAAAAAAAAAAAAA
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